Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC097467.4-201ENST00000605504 141 ntBASIC7.08□□□□□ -1.28
POLR2AP24928 RPSAP73-201ENST00000614820 330 ntBASIC7.08□□□□□ -1.28
POLR2AP24928 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.08□□□□□ -1.28
POLR2AP24928 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
POLR2AP24928 AP003972.1-201ENST00000625192 5446 ntBASIC7.07□□□□□ -1.28
POLR2AP24928 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
POLR2AP24928 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
POLR2AP24928 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.07□□□□□ -1.28
POLR2AP24928 ALB-209ENST00000503124 1741 ntTSL 5 BASIC7.07□□□□□ -1.28
POLR2AP24928 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
POLR2AP24928 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
POLR2AP24928 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.07□□□□□ -1.28
POLR2AP24928 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
POLR2AP24928 AC103591.2-201ENST00000265259 766 ntBASIC7.07□□□□□ -1.28
POLR2AP24928 RNA5SP478-201ENST00000364657 115 ntBASIC7.07□□□□□ -1.28
POLR2AP24928 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
POLR2AP24928 SNORA40.4-201ENST00000390971 128 ntBASIC7.07□□□□□ -1.28
POLR2AP24928 AC016739.1-201ENST00000405359 345 ntBASIC7.07□□□□□ -1.28
POLR2AP24928 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC7.07□□□□□ -1.28
POLR2AP24928 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC7.07□□□□□ -1.28
POLR2AP24928 MTCO3P17-201ENST00000443775 513 ntBASIC7.07□□□□□ -1.28
POLR2AP24928 SPRYD7P1-201ENST00000443861 570 ntBASIC7.07□□□□□ -1.28
POLR2AP24928 RPS26P41-201ENST00000450370 284 ntBASIC7.07□□□□□ -1.28
POLR2AP24928 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC7.07□□□□□ -1.28
POLR2AP24928 AC083795.1-201ENST00000491760 320 ntBASIC7.07□□□□□ -1.28
POLR2AP24928 AC092593.2-201ENST00000513866 913 ntBASIC7.07□□□□□ -1.28
POLR2AP24928 APPL2-203ENST00000546731 684 ntTSL 2 BASIC7.07□□□□□ -1.28
POLR2AP24928 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.07□□□□□ -1.28
POLR2AP24928 AL512329.2-201ENST00000607350 548 ntBASIC7.07□□□□□ -1.28
POLR2AP24928 AC091948.2-201ENST00000636510 279 ntBASIC7.07□□□□□ -1.28
POLR2AP24928 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
POLR2AP24928 AC127070.3-201ENST00000503695 3263 ntBASIC7.07□□□□□ -1.28
POLR2AP24928 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
POLR2AP24928 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.07□□□□□ -1.28
POLR2AP24928 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
POLR2AP24928 MRE11P1-201ENST00000464884 2127 ntBASIC7.07□□□□□ -1.28
POLR2AP24928 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
POLR2AP24928 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
POLR2AP24928 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
POLR2AP24928 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
POLR2AP24928 FBXL21-201ENST00000297158 1305 ntBASIC7.06□□□□□ -1.28
POLR2AP24928 FABP12P1-201ENST00000401911 322 ntBASIC7.06□□□□□ -1.28
POLR2AP24928 MORF4L1P5-201ENST00000433352 961 ntBASIC7.06□□□□□ -1.28
POLR2AP24928 AC097523.2-201ENST00000435551 652 ntBASIC7.06□□□□□ -1.28
POLR2AP24928 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC7.06□□□□□ -1.28
POLR2AP24928 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC7.06□□□□□ -1.28
POLR2AP24928 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC7.06□□□□□ -1.28
POLR2AP24928 AC005532.2-201ENST00000467154 373 ntBASIC7.06□□□□□ -1.28
POLR2AP24928 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.06□□□□□ -1.28
POLR2AP24928 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC7.06□□□□□ -1.28
POLR2AP24928 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.06□□□□□ -1.28
POLR2AP24928 ASB8-215ENST00000540782 659 ntTSL 3 BASIC7.06□□□□□ -1.28
POLR2AP24928 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.06□□□□□ -1.28
POLR2AP24928 MIR4776-2-201ENST00000580204 80 ntBASIC7.06□□□□□ -1.28
POLR2AP24928 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC7.06□□□□□ -1.28
POLR2AP24928 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC7.06□□□□□ -1.28
POLR2AP24928 AC090510.2-201ENST00000617465 629 ntBASIC7.06□□□□□ -1.28
POLR2AP24928 AC007683.2-201ENST00000624681 714 ntBASIC7.06□□□□□ -1.28
POLR2AP24928 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.06□□□□□ -1.28
POLR2AP24928 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC7.06□□□□□ -1.28
POLR2AP24928 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
POLR2AP24928 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
POLR2AP24928 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
POLR2AP24928 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
POLR2AP24928 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
POLR2AP24928 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
POLR2AP24928 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
POLR2AP24928 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
POLR2AP24928 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
POLR2AP24928 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
POLR2AP24928 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
POLR2AP24928 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.06□□□□□ -1.28
POLR2AP24928 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
POLR2AP24928 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.06□□□□□ -1.28
POLR2AP24928 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC7.06□□□□□ -1.28
POLR2AP24928 MORF4L1P4-201ENST00000450245 976 ntBASIC7.06□□□□□ -1.28
POLR2AP24928 RN7SL610P-201ENST00000463845 291 ntBASIC7.06□□□□□ -1.28
POLR2AP24928 HAUS1P1-201ENST00000505275 832 ntBASIC7.06□□□□□ -1.28
POLR2AP24928 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.06□□□□□ -1.28
POLR2AP24928 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.06□□□□□ -1.28
POLR2AP24928 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.06□□□□□ -1.28
POLR2AP24928 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
POLR2AP24928 YES1P1-201ENST00000418510 1628 ntBASIC7.06□□□□□ -1.28
POLR2AP24928 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
POLR2AP24928 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
POLR2AP24928 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
POLR2AP24928 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC7.05□□□□□ -1.28
POLR2AP24928 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
POLR2AP24928 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
POLR2AP24928 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
POLR2AP24928 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC7.05□□□□□ -1.28
POLR2AP24928 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
POLR2AP24928 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.05□□□□□ -1.28
POLR2AP24928 MROH3P-201ENST00000435735 2676 ntBASIC7.05□□□□□ -1.28
POLR2AP24928 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.05□□□□□ -1.28
POLR2AP24928 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.05□□□□□ -1.28
POLR2AP24928 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.05□□□□□ -1.28
POLR2AP24928 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
POLR2AP24928 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
POLR2AP24928 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms