Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RNU6-452P-201ENST00000384406 107 ntBASIC8.2□□□□□ -1.1
RFX1P22670 SNORA68-201ENST00000384437 133 ntBASIC8.2□□□□□ -1.1
RFX1P22670 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC8.2□□□□□ -1.1
RFX1P22670 AC007435.1-201ENST00000421086 415 ntBASIC8.2□□□□□ -1.1
RFX1P22670 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC8.2□□□□□ -1.1
RFX1P22670 GAPDHP51-201ENST00000426454 1000 ntBASIC8.2□□□□□ -1.1
RFX1P22670 MTCO1P3-201ENST00000429327 192 ntBASIC8.2□□□□□ -1.1
RFX1P22670 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC8.2□□□□□ -1.1
RFX1P22670 AL591503.2-201ENST00000442314 1005 ntBASIC8.2□□□□□ -1.1
RFX1P22670 AL137074.1-201ENST00000442640 465 ntBASIC8.2□□□□□ -1.1
RFX1P22670 AC005002.1-201ENST00000447458 540 ntBASIC8.2□□□□□ -1.1
RFX1P22670 NDUFAF4P4-201ENST00000454883 502 ntBASIC8.2□□□□□ -1.1
RFX1P22670 TREML3P-201ENST00000457327 501 ntBASIC8.2□□□□□ -1.1
RFX1P22670 RN7SL19P-201ENST00000462522 306 ntBASIC8.2□□□□□ -1.1
RFX1P22670 RN7SL332P-201ENST00000482163 254 ntBASIC8.2□□□□□ -1.1
RFX1P22670 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC8.2□□□□□ -1.1
RFX1P22670 RN7SL153P-201ENST00000486501 292 ntBASIC8.2□□□□□ -1.1
RFX1P22670 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC8.2□□□□□ -1.1
RFX1P22670 AC084871.2-201ENST00000503355 464 ntBASIC8.2□□□□□ -1.1
RFX1P22670 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC8.2□□□□□ -1.1
RFX1P22670 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC8.2□□□□□ -1.1
RFX1P22670 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC8.2□□□□□ -1.1
RFX1P22670 AC008837.2-201ENST00000513076 418 ntBASIC8.2□□□□□ -1.1
RFX1P22670 RNU2-30P-201ENST00000516209 141 ntBASIC8.2□□□□□ -1.1
RFX1P22670 NDUFA5P2-201ENST00000519723 344 ntBASIC8.2□□□□□ -1.1
RFX1P22670 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC8.2□□□□□ -1.1
RFX1P22670 AC092851.1-201ENST00000535964 478 ntBASIC8.2□□□□□ -1.1
RFX1P22670 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
RFX1P22670 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC8.2□□□□□ -1.1
RFX1P22670 AC025260.1-201ENST00000548858 430 ntBASIC8.2□□□□□ -1.1
RFX1P22670 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC8.2□□□□□ -1.1
RFX1P22670 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC8.2□□□□□ -1.1
RFX1P22670 AC092718.4-201ENST00000566639 716 ntBASIC8.2□□□□□ -1.1
RFX1P22670 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC8.2□□□□□ -1.1
RFX1P22670 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC8.2□□□□□ -1.1
RFX1P22670 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC8.2□□□□□ -1.1
RFX1P22670 AC011193.2-201ENST00000582638 367 ntBASIC8.2□□□□□ -1.1
RFX1P22670 AC073544.2-201ENST00000601155 540 ntBASIC8.2□□□□□ -1.1
RFX1P22670 AC069545.1-201ENST00000605671 358 ntBASIC8.2□□□□□ -1.1
RFX1P22670 AC011472.4-201ENST00000615848 491 ntBASIC8.2□□□□□ -1.1
RFX1P22670 AC106782.7-201ENST00000624024 418 ntBASIC8.2□□□□□ -1.1
RFX1P22670 AC133555.5-201ENST00000624430 418 ntBASIC8.2□□□□□ -1.1
RFX1P22670 GAS2-210ENST00000630668 674 ntTSL 5 BASIC8.2□□□□□ -1.1
RFX1P22670 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC8.2□□□□□ -1.1
RFX1P22670 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC8.2□□□□□ -1.1
RFX1P22670 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
RFX1P22670 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
RFX1P22670 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RFX1P22670 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RFX1P22670 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RFX1P22670 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC8.19□□□□□ -1.1
RFX1P22670 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RFX1P22670 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RFX1P22670 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RFX1P22670 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
RFX1P22670 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
RFX1P22670 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
RFX1P22670 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RFX1P22670 Z99129.4-201ENST00000624649 2435 ntBASIC8.19□□□□□ -1.1
RFX1P22670 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
RFX1P22670 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
RFX1P22670 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC8.19□□□□□ -1.1
RFX1P22670 MTND5P23-201ENST00000430812 1655 ntBASIC8.19□□□□□ -1.1
RFX1P22670 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
RFX1P22670 RNU4-7P-201ENST00000364758 141 ntBASIC8.19□□□□□ -1.1
RFX1P22670 RNU1-122P-201ENST00000365538 156 ntBASIC8.19□□□□□ -1.1
RFX1P22670 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RFX1P22670 RNU6-1200P-201ENST00000384162 107 ntBASIC8.19□□□□□ -1.1
RFX1P22670 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RFX1P22670 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RFX1P22670 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC8.19□□□□□ -1.1
RFX1P22670 AC012519.1-201ENST00000424588 610 ntBASIC8.19□□□□□ -1.1
RFX1P22670 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RFX1P22670 ATP5F1P1-201ENST00000433775 569 ntBASIC8.19□□□□□ -1.1
RFX1P22670 MTCO1P52-201ENST00000433928 531 ntBASIC8.19□□□□□ -1.1
RFX1P22670 RPS24P1-201ENST00000438550 371 ntBASIC8.19□□□□□ -1.1
RFX1P22670 MTCO2P25-201ENST00000447065 681 ntBASIC8.19□□□□□ -1.1
RFX1P22670 GAPDHP16-201ENST00000448152 962 ntBASIC8.19□□□□□ -1.1
RFX1P22670 AC234771.3-201ENST00000454984 622 ntBASIC8.19□□□□□ -1.1
RFX1P22670 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC8.19□□□□□ -1.1
RFX1P22670 RPL7P1-201ENST00000468161 747 ntBASIC8.19□□□□□ -1.1
RFX1P22670 RPL7P9-201ENST00000468715 747 ntBASIC8.19□□□□□ -1.1
RFX1P22670 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC8.19□□□□□ -1.1
RFX1P22670 AC068724.1-201ENST00000487100 792 ntBASIC8.19□□□□□ -1.1
RFX1P22670 LTV1P1-201ENST00000510683 1237 ntBASIC8.19□□□□□ -1.1
RFX1P22670 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC8.19□□□□□ -1.1
RFX1P22670 AC117383.2-201ENST00000514722 322 ntBASIC8.19□□□□□ -1.1
RFX1P22670 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC8.19□□□□□ -1.1
RFX1P22670 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC8.19□□□□□ -1.1
RFX1P22670 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC8.19□□□□□ -1.1
RFX1P22670 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC8.19□□□□□ -1.1
RFX1P22670 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC8.19□□□□□ -1.1
RFX1P22670 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RFX1P22670 HIGD1AP10-201ENST00000527837 282 ntBASIC8.19□□□□□ -1.1
RFX1P22670 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC8.19□□□□□ -1.1
RFX1P22670 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC8.19□□□□□ -1.1
RFX1P22670 AC074051.3-201ENST00000570238 358 ntBASIC8.19□□□□□ -1.1
RFX1P22670 AC024614.1-201ENST00000577546 307 ntBASIC8.19□□□□□ -1.1
RFX1P22670 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC8.19□□□□□ -1.1
RFX1P22670 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms