Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC7.59□□□□□ -1.19
NFKB1P19838 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
NFKB1P19838 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC7.59□□□□□ -1.19
NFKB1P19838 AC127502.3-201ENST00000636170 1206 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC7.59□□□□□ -1.19
NFKB1P19838 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.59□□□□□ -1.19
NFKB1P19838 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC7.59□□□□□ -1.19
NFKB1P19838 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
NFKB1P19838 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NFKB1P19838 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
NFKB1P19838 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
NFKB1P19838 SOCS5P5-201ENST00000402732 1586 ntBASIC7.59□□□□□ -1.2
NFKB1P19838 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
NFKB1P19838 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC7.58□□□□□ -1.2
NFKB1P19838 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC7.58□□□□□ -1.2
NFKB1P19838 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NFKB1P19838 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NFKB1P19838 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NFKB1P19838 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.58□□□□□ -1.2
NFKB1P19838 MAPK10-333ENST00000641607 2481 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.58□□□□□ -1.2
NFKB1P19838 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NFKB1P19838 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC7.58□□□□□ -1.2
NFKB1P19838 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
NFKB1P19838 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
NFKB1P19838 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NFKB1P19838 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
NFKB1P19838 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.58□□□□□ -1.2
NFKB1P19838 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
NFKB1P19838 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NFKB1P19838 RN7SKP174-201ENST00000363803 330 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 RNU6-1251P-201ENST00000364502 107 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NFKB1P19838 Y_RNA.408-201ENST00000383987 102 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NFKB1P19838 RAN-201ENST00000392367 780 ntTSL 5 BASIC7.58□□□□□ -1.2
NFKB1P19838 PTMAP8-201ENST00000397729 342 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC7.58□□□□□ -1.2
NFKB1P19838 AC068138.1-201ENST00000412635 217 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC7.58□□□□□ -1.2
NFKB1P19838 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC7.58□□□□□ -1.2
NFKB1P19838 Z83313.1-201ENST00000433780 718 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 AC245452.2-201ENST00000435222 392 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC7.58□□□□□ -1.2
NFKB1P19838 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC7.58□□□□□ -1.2
NFKB1P19838 TPT1P14-201ENST00000448018 505 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC7.58□□□□□ -1.2
NFKB1P19838 AMD1P1-201ENST00000457220 922 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 RPL35AP19-201ENST00000469425 329 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC7.58□□□□□ -1.2
NFKB1P19838 AC004924.1-201ENST00000480160 781 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 AC009153.1-201ENST00000485799 496 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 RN7SL569P-201ENST00000494652 288 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NFKB1P19838 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC7.58□□□□□ -1.2
NFKB1P19838 OR5H5P-201ENST00000503164 928 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 AC084024.2-201ENST00000503480 791 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC7.58□□□□□ -1.2
NFKB1P19838 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC7.58□□□□□ -1.2
NFKB1P19838 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC7.58□□□□□ -1.2
NFKB1P19838 AC025881.1-201ENST00000518851 512 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 OR5AZ1P-201ENST00000527448 943 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC7.58□□□□□ -1.2
NFKB1P19838 ANP32BP3-201ENST00000559213 706 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC7.58□□□□□ -1.2
NFKB1P19838 AC105275.2-201ENST00000567907 711 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 RN7SL14P-201ENST00000579715 298 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC7.58□□□□□ -1.2
NFKB1P19838 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC7.58□□□□□ -1.2
NFKB1P19838 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NFKB1P19838 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC7.58□□□□□ -1.2
NFKB1P19838 AC007497.1-201ENST00000610421 561 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC7.58□□□□□ -1.2
NFKB1P19838 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC7.58□□□□□ -1.2
NFKB1P19838 AL353898.2-201ENST00000623000 255 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 AC110769.3-201ENST00000624567 1173 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 AC099654.5-201ENST00000636479 350 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 AC099654.14-201ENST00000638599 341 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
NFKB1P19838 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NFKB1P19838 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NFKB1P19838 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
NFKB1P19838 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC7.58□□□□□ -1.2
NFKB1P19838 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
NFKB1P19838 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NFKB1P19838 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC7.58□□□□□ -1.2
NFKB1P19838 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC7.58□□□□□ -1.2
NFKB1P19838 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NFKB1P19838 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NFKB1P19838 AL357556.1-201ENST00000421884 1388 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 AL449283.1-201ENST00000602631 3403 ntBASIC7.58□□□□□ -1.2
NFKB1P19838 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
NFKB1P19838 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.57□□□□□ -1.2
NFKB1P19838 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NFKB1P19838 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
NFKB1P19838 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NFKB1P19838 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NFKB1P19838 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
NFKB1P19838 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
NFKB1P19838 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms