Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC122685.1-202ENST00000556750 555 ntTSL 2 BASIC6.51□□□□□ -1.37
ATF4P18848 AC009120.2-202ENST00000566411 679 ntTSL 3 BASIC6.51□□□□□ -1.37
ATF4P18848 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC6.51□□□□□ -1.37
ATF4P18848 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC6.51□□□□□ -1.37
ATF4P18848 ZNF286A-214ENST00000581529 560 ntTSL 4 BASIC6.51□□□□□ -1.37
ATF4P18848 LINC01927-201ENST00000582231 712 ntTSL 3 BASIC6.51□□□□□ -1.37
ATF4P18848 AC005758.1-201ENST00000586408 625 ntBASIC6.51□□□□□ -1.37
ATF4P18848 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.51□□□□□ -1.37
ATF4P18848 WFDC21P-207ENST00000590346 630 ntTSL 3 BASIC6.51□□□□□ -1.37
ATF4P18848 AL133351.4-201ENST00000604204 631 ntBASIC6.51□□□□□ -1.37
ATF4P18848 AC104794.4-201ENST00000607181 446 ntBASIC6.51□□□□□ -1.37
ATF4P18848 AL133520.1-201ENST00000610430 700 ntBASIC6.51□□□□□ -1.37
ATF4P18848 AL352984.2-201ENST00000611153 546 ntBASIC6.51□□□□□ -1.37
ATF4P18848 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC6.51□□□□□ -1.37
ATF4P18848 AC009120.2-201ENST00000620711 522 ntTSL 3 BASIC6.51□□□□□ -1.37
ATF4P18848 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
ATF4P18848 LINC01206-219ENST00000625703 820 ntTSL 5 BASIC6.51□□□□□ -1.37
ATF4P18848 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.51□□□□□ -1.37
ATF4P18848 AP000550.3-201ENST00000637734 379 ntBASIC6.51□□□□□ -1.37
ATF4P18848 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
ATF4P18848 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ATF4P18848 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.51□□□□□ -1.37
ATF4P18848 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATF4P18848 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATF4P18848 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ATF4P18848 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
ATF4P18848 AP003486.1-201ENST00000525716 3994 ntBASIC6.51□□□□□ -1.37
ATF4P18848 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC6.51□□□□□ -1.37
ATF4P18848 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC6.51□□□□□ -1.37
ATF4P18848 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATF4P18848 AC004014.2-201ENST00000623718 5122 ntBASIC6.51□□□□□ -1.37
ATF4P18848 PIGA-201ENST00000333590 3652 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATF4P18848 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.51□□□□□ -1.37
ATF4P18848 AC107982.1-201ENST00000507171 1300 ntBASIC6.5□□□□□ -1.37
ATF4P18848 MFSD1P1-201ENST00000576210 1327 ntBASIC6.5□□□□□ -1.37
ATF4P18848 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.5□□□□□ -1.37
ATF4P18848 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
ATF4P18848 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.5□□□□□ -1.37
ATF4P18848 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC6.5□□□□□ -1.37
ATF4P18848 MAPK10-319ENST00000641459 2542 ntBASIC6.5□□□□□ -1.37
ATF4P18848 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
ATF4P18848 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
ATF4P18848 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.5□□□□□ -1.37
ATF4P18848 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ATF4P18848 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ATF4P18848 DCLRE1C-209ENST00000378278 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ATF4P18848 OR3A1-201ENST00000323404 1650 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
ATF4P18848 CD44-205ENST00000352818 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
ATF4P18848 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
ATF4P18848 RNU6-582P-201ENST00000362989 107 ntBASIC6.5□□□□□ -1.37
ATF4P18848 RNU6-492P-201ENST00000363035 104 ntBASIC6.5□□□□□ -1.37
ATF4P18848 NR1I3-206ENST00000367984 1059 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ATF4P18848 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.5□□□□□ -1.37
ATF4P18848 Y_RNA.408-201ENST00000383987 102 ntBASIC6.5□□□□□ -1.37
ATF4P18848 RPL5P5-201ENST00000392009 893 ntBASIC6.5□□□□□ -1.37
ATF4P18848 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
ATF4P18848 OR6B1-201ENST00000408922 1055 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
ATF4P18848 RNU2-6P-201ENST00000411404 190 ntBASIC6.5□□□□□ -1.37
ATF4P18848 SNRPGP11-201ENST00000411777 232 ntBASIC6.5□□□□□ -1.37
ATF4P18848 AL513302.1-201ENST00000415679 428 ntBASIC6.5□□□□□ -1.37
ATF4P18848 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC6.5□□□□□ -1.37
ATF4P18848 RPL5P34-201ENST00000426545 891 ntBASIC6.5□□□□□ -1.37
ATF4P18848 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC6.5□□□□□ -1.37
ATF4P18848 AC239727.1-201ENST00000431432 623 ntTSL 3 BASIC6.5□□□□□ -1.37
ATF4P18848 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC6.5□□□□□ -1.37
ATF4P18848 AC008072.1-201ENST00000434254 824 ntBASIC6.5□□□□□ -1.37
ATF4P18848 RPS25P9-201ENST00000435591 252 ntBASIC6.5□□□□□ -1.37
ATF4P18848 AC092106.2-201ENST00000436597 487 ntBASIC6.5□□□□□ -1.37
ATF4P18848 AL138878.2-201ENST00000440581 1241 ntBASIC6.5□□□□□ -1.37
ATF4P18848 ASS1P11-201ENST00000441309 1216 ntBASIC6.5□□□□□ -1.37
ATF4P18848 TAF9P1-201ENST00000445421 515 ntBASIC6.5□□□□□ -1.37
ATF4P18848 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.5□□□□□ -1.37
ATF4P18848 FTH1P27-201ENST00000449509 551 ntBASIC6.5□□□□□ -1.37
ATF4P18848 AC105393.1-202ENST00000449621 598 ntTSL 3 BASIC6.5□□□□□ -1.37
ATF4P18848 AL096855.1-201ENST00000449895 516 ntTSL 3 BASIC6.5□□□□□ -1.37
ATF4P18848 LINC01830-201ENST00000450551 636 ntTSL 5 BASIC6.5□□□□□ -1.37
ATF4P18848 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.5□□□□□ -1.37
ATF4P18848 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC6.5□□□□□ -1.37
ATF4P18848 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.5□□□□□ -1.37
ATF4P18848 AC069213.3-201ENST00000454858 474 ntBASIC6.5□□□□□ -1.37
ATF4P18848 TAF9P2-201ENST00000454958 515 ntBASIC6.5□□□□□ -1.37
ATF4P18848 SNX18P4-201ENST00000456554 838 ntBASIC6.5□□□□□ -1.37
ATF4P18848 RN7SL420P-201ENST00000463843 298 ntBASIC6.5□□□□□ -1.37
ATF4P18848 AC072039.1-201ENST00000477611 581 ntBASIC6.5□□□□□ -1.37
ATF4P18848 RPL21P6-201ENST00000479171 504 ntBASIC6.5□□□□□ -1.37
ATF4P18848 RPS7P6-201ENST00000485777 579 ntBASIC6.5□□□□□ -1.37
ATF4P18848 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
ATF4P18848 FTH1P8-201ENST00000498161 514 ntBASIC6.5□□□□□ -1.37
ATF4P18848 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC6.5□□□□□ -1.37
ATF4P18848 ARL4AP1-201ENST00000503220 705 ntBASIC6.5□□□□□ -1.37
ATF4P18848 AC011352.3-201ENST00000505162 593 ntBASIC6.5□□□□□ -1.37
ATF4P18848 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC6.5□□□□□ -1.37
ATF4P18848 HMGB3P13-201ENST00000511263 607 ntBASIC6.5□□□□□ -1.37
ATF4P18848 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC6.5□□□□□ -1.37
ATF4P18848 TRIM6-211ENST00000515022 1060 ntTSL 2 BASIC6.5□□□□□ -1.37
ATF4P18848 RNU6-885P-201ENST00000516607 104 ntBASIC6.5□□□□□ -1.37
ATF4P18848 NDUFA5P2-201ENST00000519723 344 ntBASIC6.5□□□□□ -1.37
ATF4P18848 IGHV7-40-201ENST00000520963 296 ntBASIC6.5□□□□□ -1.37
ATF4P18848 KCTD21-AS1-204ENST00000528468 554 ntTSL 4 BASIC6.5□□□□□ -1.37
ATF4P18848 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms