Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC6.93□□□□□ -1.3
HOXC6P09630 AC069234.4-201ENST00000621276 412 ntBASIC6.93□□□□□ -1.3
HOXC6P09630 MIR193BHG-214ENST00000641765 509 ntBASIC6.93□□□□□ -1.3
HOXC6P09630 AL359195.2-201ENST00000623657 4412 ntBASIC6.93□□□□□ -1.3
HOXC6P09630 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HOXC6P09630 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
HOXC6P09630 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
HOXC6P09630 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
HOXC6P09630 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
HOXC6P09630 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HOXC6P09630 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HOXC6P09630 NEPNP-201ENST00000404786 1371 ntBASIC6.93□□□□□ -1.3
HOXC6P09630 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.93□□□□□ -1.3
HOXC6P09630 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
HOXC6P09630 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.93□□□□□ -1.3
HOXC6P09630 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HOXC6P09630 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HOXC6P09630 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HOXC6P09630 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HOXC6P09630 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.92□□□□□ -1.3
HOXC6P09630 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
HOXC6P09630 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HOXC6P09630 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HOXC6P09630 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
HOXC6P09630 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
HOXC6P09630 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.92□□□□□ -1.3
HOXC6P09630 FUNDC2P3-201ENST00000334716 533 ntBASIC6.92□□□□□ -1.3
HOXC6P09630 RN7SKP160-201ENST00000363804 340 ntBASIC6.92□□□□□ -1.3
HOXC6P09630 RNA5SP132-201ENST00000364725 118 ntBASIC6.92□□□□□ -1.3
HOXC6P09630 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.92□□□□□ -1.3
HOXC6P09630 RPL34P3-201ENST00000421454 338 ntBASIC6.92□□□□□ -1.3
HOXC6P09630 CLUHP1-201ENST00000435012 1190 ntBASIC6.92□□□□□ -1.3
HOXC6P09630 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.92□□□□□ -1.3
HOXC6P09630 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
HOXC6P09630 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HOXC6P09630 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.92□□□□□ -1.3
HOXC6P09630 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC6.92□□□□□ -1.3
HOXC6P09630 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.92□□□□□ -1.3
HOXC6P09630 AC092865.1-201ENST00000544395 1023 ntBASIC6.92□□□□□ -1.3
HOXC6P09630 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.92□□□□□ -1.3
HOXC6P09630 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.92□□□□□ -1.3
HOXC6P09630 AC016180.1-201ENST00000567945 403 ntBASIC6.92□□□□□ -1.3
HOXC6P09630 AP001496.3-201ENST00000580230 913 ntBASIC6.92□□□□□ -1.3
HOXC6P09630 AC012254.5-201ENST00000623573 478 ntBASIC6.92□□□□□ -1.3
HOXC6P09630 OR7A1P-202ENST00000641542 1158 ntBASIC6.92□□□□□ -1.3
HOXC6P09630 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HOXC6P09630 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HOXC6P09630 LCOR-201ENST00000286067 4542 ntBASIC6.92□□□□□ -1.3
HOXC6P09630 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HOXC6P09630 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.92□□□□□ -1.3
HOXC6P09630 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HOXC6P09630 AP002833.3-201ENST00000625075 2265 ntBASIC6.92□□□□□ -1.3
HOXC6P09630 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
HOXC6P09630 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
HOXC6P09630 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
HOXC6P09630 CDY5P-201ENST00000411487 1580 ntBASIC6.91□□□□□ -1.3
HOXC6P09630 CDY9P-201ENST00000451397 1580 ntBASIC6.91□□□□□ -1.3
HOXC6P09630 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
HOXC6P09630 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HOXC6P09630 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.91□□□□□ -1.3
HOXC6P09630 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
HOXC6P09630 AL731556.1-201ENST00000394628 3711 ntBASIC6.91□□□□□ -1.3
HOXC6P09630 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HOXC6P09630 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HOXC6P09630 RNU105B-201ENST00000364478 208 ntBASIC6.91□□□□□ -1.3
HOXC6P09630 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.91□□□□□ -1.3
HOXC6P09630 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.91□□□□□ -1.3
HOXC6P09630 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.91□□□□□ -1.3
HOXC6P09630 KIF4CP-201ENST00000422742 1279 ntBASIC6.91□□□□□ -1.3
HOXC6P09630 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.91□□□□□ -1.3
HOXC6P09630 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.91□□□□□ -1.3
HOXC6P09630 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.91□□□□□ -1.3
HOXC6P09630 AC009237.1-201ENST00000442127 744 ntBASIC6.91□□□□□ -1.3
HOXC6P09630 OR13K1P-201ENST00000444577 975 ntBASIC6.91□□□□□ -1.3
HOXC6P09630 AL512593.1-201ENST00000444758 779 ntBASIC6.91□□□□□ -1.3
HOXC6P09630 AC023245.1-201ENST00000468501 517 ntBASIC6.91□□□□□ -1.3
HOXC6P09630 AC114728.1-201ENST00000488289 483 ntBASIC6.91□□□□□ -1.3
HOXC6P09630 SNORA70.20-201ENST00000516848 126 ntBASIC6.91□□□□□ -1.3
HOXC6P09630 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.91□□□□□ -1.3
HOXC6P09630 AC073581.1-201ENST00000519036 575 ntBASIC6.91□□□□□ -1.3
HOXC6P09630 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.91□□□□□ -1.3
HOXC6P09630 AC027229.1-201ENST00000583887 253 ntBASIC6.91□□□□□ -1.3
HOXC6P09630 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.91□□□□□ -1.3
HOXC6P09630 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.91□□□□□ -1.3
HOXC6P09630 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.91□□□□□ -1.3
HOXC6P09630 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.91□□□□□ -1.3
HOXC6P09630 AC141002.1-201ENST00000607025 279 ntBASIC6.91□□□□□ -1.3
HOXC6P09630 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.91□□□□□ -1.3
HOXC6P09630 AC079776.5-201ENST00000641920 211 ntBASIC6.91□□□□□ -1.3
HOXC6P09630 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HOXC6P09630 AC119674.1-202ENST00000641333 1860 ntBASIC6.91□□□□□ -1.3
HOXC6P09630 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HOXC6P09630 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HOXC6P09630 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HOXC6P09630 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HOXC6P09630 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
HOXC6P09630 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
HOXC6P09630 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
HOXC6P09630 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
HOXC6P09630 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms