Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AP001437.1-201ENST00000608783 456 ntBASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AL021918.2-201ENST00000613415 194 ntBASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AC097641.3-201ENST00000613523 464 ntBASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AC096708.4-201ENST00000620563 552 ntBASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AL136228.1-201ENST00000622221 319 ntBASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AC073592.6-201ENST00000624271 415 ntBASIC6.08□□□□□ -1.44
HLA-DQB2P05538 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 THAP12P9-201ENST00000503971 2360 ntBASIC6.08□□□□□ -1.44
HLA-DQB2P05538 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 AP004289.1-201ENST00000436307 2205 ntBASIC6.07□□□□□ -1.44
HLA-DQB2P05538 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 COX6B1P3-201ENST00000312310 260 ntBASIC6.07□□□□□ -1.44
HLA-DQB2P05538 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 AL354890.1-201ENST00000413730 346 ntBASIC6.07□□□□□ -1.44
HLA-DQB2P05538 MTND4LP17-201ENST00000414607 293 ntBASIC6.07□□□□□ -1.44
HLA-DQB2P05538 RPSAP40-201ENST00000442343 891 ntBASIC6.07□□□□□ -1.44
HLA-DQB2P05538 RPS7P3-201ENST00000443360 580 ntBASIC6.07□□□□□ -1.44
HLA-DQB2P05538 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.07□□□□□ -1.44
HLA-DQB2P05538 RBBP4P1-201ENST00000502424 1276 ntBASIC6.07□□□□□ -1.44
HLA-DQB2P05538 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 RNA5SP116-201ENST00000516132 98 ntBASIC6.07□□□□□ -1.44
HLA-DQB2P05538 RNA5SP340-201ENST00000517132 107 ntBASIC6.07□□□□□ -1.44
HLA-DQB2P05538 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.07□□□□□ -1.44
HLA-DQB2P05538 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 CYCSP38-201ENST00000559840 322 ntBASIC6.07□□□□□ -1.44
HLA-DQB2P05538 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 AP001052.1-201ENST00000626421 99 ntBASIC6.07□□□□□ -1.44
HLA-DQB2P05538 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 RBPJP7-201ENST00000442803 1447 ntBASIC6.07□□□□□ -1.44
HLA-DQB2P05538 RBPJP5-201ENST00000449433 1447 ntBASIC6.07□□□□□ -1.44
HLA-DQB2P05538 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 AC012254.3-201ENST00000591183 2117 ntBASIC6.07□□□□□ -1.44
HLA-DQB2P05538 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HLA-DQB2P05538 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 RN7SKP77-201ENST00000363261 353 ntBASIC6.06□□□□□ -1.44
HLA-DQB2P05538 RN7SKP187-201ENST00000365536 330 ntBASIC6.06□□□□□ -1.44
HLA-DQB2P05538 RNU4-64P-201ENST00000410795 131 ntBASIC6.06□□□□□ -1.44
HLA-DQB2P05538 RPS14P4-201ENST00000415880 418 ntBASIC6.06□□□□□ -1.44
HLA-DQB2P05538 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 AC099677.3-201ENST00000427081 395 ntBASIC6.06□□□□□ -1.44
HLA-DQB2P05538 GAPDHP75-201ENST00000433910 943 ntBASIC6.06□□□□□ -1.44
HLA-DQB2P05538 AL445928.1-201ENST00000435545 222 ntBASIC6.06□□□□□ -1.44
HLA-DQB2P05538 AMYP1-201ENST00000440059 1023 ntBASIC6.06□□□□□ -1.44
HLA-DQB2P05538 ATP5LP2-201ENST00000440646 311 ntBASIC6.06□□□□□ -1.44
HLA-DQB2P05538 PPIAP27-201ENST00000453800 265 ntBASIC6.06□□□□□ -1.44
HLA-DQB2P05538 Z83838.1-202ENST00000456225 839 ntBASIC6.06□□□□□ -1.44
HLA-DQB2P05538 AC068228.1-201ENST00000461723 211 ntBASIC6.06□□□□□ -1.44
HLA-DQB2P05538 AC023194.2-201ENST00000465398 406 ntBASIC6.06□□□□□ -1.44
HLA-DQB2P05538 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 AP002884.1-201ENST00000479691 655 ntBASIC6.06□□□□□ -1.44
HLA-DQB2P05538 RN7SL741P-201ENST00000482473 289 ntBASIC6.06□□□□□ -1.44
HLA-DQB2P05538 AC008629.2-201ENST00000503783 483 ntBASIC6.06□□□□□ -1.44
HLA-DQB2P05538 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms