Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 DPY19L1P1-201ENST00000417811 2594 ntBASIC7.22□□□□□ -1.25
COL1A1P02452 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
COL1A1P02452 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.22□□□□□ -1.25
COL1A1P02452 BRD7P6-201ENST00000431406 1860 ntBASIC7.22□□□□□ -1.25
COL1A1P02452 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.22□□□□□ -1.25
COL1A1P02452 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL1A1P02452 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC7.22□□□□□ -1.25
COL1A1P02452 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
COL1A1P02452 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL1A1P02452 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL1A1P02452 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL1A1P02452 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
COL1A1P02452 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.22□□□□□ -1.25
COL1A1P02452 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL1A1P02452 BMS1P17-202ENST00000416720 316 ntBASIC7.22□□□□□ -1.25
COL1A1P02452 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC7.22□□□□□ -1.25
COL1A1P02452 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC7.22□□□□□ -1.25
COL1A1P02452 RPL23AP60-201ENST00000450011 454 ntBASIC7.22□□□□□ -1.25
COL1A1P02452 YWHAEP1-201ENST00000453697 763 ntBASIC7.22□□□□□ -1.25
COL1A1P02452 AC006539.1-201ENST00000481419 501 ntBASIC7.22□□□□□ -1.25
COL1A1P02452 OR56A7P-201ENST00000524865 941 ntBASIC7.22□□□□□ -1.25
COL1A1P02452 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC7.22□□□□□ -1.25
COL1A1P02452 DPPA2P4-201ENST00000563717 878 ntBASIC7.22□□□□□ -1.25
COL1A1P02452 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.22□□□□□ -1.25
COL1A1P02452 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC7.22□□□□□ -1.25
COL1A1P02452 AC067852.5-201ENST00000589299 310 ntBASIC7.22□□□□□ -1.25
COL1A1P02452 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL1A1P02452 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC7.22□□□□□ -1.25
COL1A1P02452 AC087269.2-201ENST00000641764 975 ntBASIC7.22□□□□□ -1.25
COL1A1P02452 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.22□□□□□ -1.25
COL1A1P02452 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL1A1P02452 AC022819.1-201ENST00000563495 3910 ntBASIC7.22□□□□□ -1.25
COL1A1P02452 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL1A1P02452 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
COL1A1P02452 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
COL1A1P02452 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
COL1A1P02452 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
COL1A1P02452 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC7.21□□□□□ -1.25
COL1A1P02452 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.21□□□□□ -1.25
COL1A1P02452 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
COL1A1P02452 AL121768.1-201ENST00000613917 2544 ntBASIC7.21□□□□□ -1.26
COL1A1P02452 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
COL1A1P02452 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.21□□□□□ -1.26
COL1A1P02452 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.21□□□□□ -1.26
COL1A1P02452 RNA5SP46-201ENST00000362370 120 ntBASIC7.21□□□□□ -1.26
COL1A1P02452 RN7SKP160-201ENST00000363804 340 ntBASIC7.21□□□□□ -1.26
COL1A1P02452 AL391422.1-201ENST00000402155 436 ntBASIC7.21□□□□□ -1.26
COL1A1P02452 RN7SKP166-201ENST00000410812 305 ntBASIC7.21□□□□□ -1.26
COL1A1P02452 AL355433.1-201ENST00000422804 300 ntBASIC7.21□□□□□ -1.26
COL1A1P02452 AL627308.1-201ENST00000435693 821 ntBASIC7.21□□□□□ -1.26
COL1A1P02452 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC7.21□□□□□ -1.26
COL1A1P02452 OR13K1P-201ENST00000444577 975 ntBASIC7.21□□□□□ -1.26
COL1A1P02452 AC073909.1-201ENST00000447112 999 ntBASIC7.21□□□□□ -1.26
COL1A1P02452 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.21□□□□□ -1.26
COL1A1P02452 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC7.21□□□□□ -1.26
COL1A1P02452 COPS8P2-201ENST00000473228 627 ntBASIC7.21□□□□□ -1.26
COL1A1P02452 RN7SL799P-201ENST00000475891 298 ntBASIC7.21□□□□□ -1.26
COL1A1P02452 RN7SL466P-201ENST00000497546 295 ntBASIC7.21□□□□□ -1.26
COL1A1P02452 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC7.21□□□□□ -1.26
COL1A1P02452 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC7.21□□□□□ -1.26
COL1A1P02452 IGKV2-18-201ENST00000522607 343 ntBASIC7.21□□□□□ -1.26
COL1A1P02452 HMGN2P36-201ENST00000529541 409 ntBASIC7.21□□□□□ -1.26
COL1A1P02452 MIR1273E-201ENST00000581165 102 ntBASIC7.21□□□□□ -1.26
COL1A1P02452 AC137695.1-201ENST00000604126 489 ntBASIC7.21□□□□□ -1.26
COL1A1P02452 AL683813.2-201ENST00000605245 502 ntBASIC7.21□□□□□ -1.26
COL1A1P02452 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC7.21□□□□□ -1.26
COL1A1P02452 AC018445.2-201ENST00000622987 260 ntBASIC7.21□□□□□ -1.26
COL1A1P02452 WDR75-207ENST00000631047 270 ntTSL 5 BASIC7.21□□□□□ -1.26
COL1A1P02452 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
COL1A1P02452 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.21□□□□□ -1.26
COL1A1P02452 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
COL1A1P02452 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.21□□□□□ -1.26
COL1A1P02452 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
COL1A1P02452 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.21□□□□□ -1.26
COL1A1P02452 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
COL1A1P02452 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
COL1A1P02452 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL1A1P02452 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
COL1A1P02452 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
COL1A1P02452 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL1A1P02452 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.2□□□□□ -1.26
COL1A1P02452 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL1A1P02452 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.2□□□□□ -1.26
COL1A1P02452 AC123769.2-201ENST00000624332 5984 ntBASIC7.2□□□□□ -1.26
COL1A1P02452 SNORA58B-201ENST00000364259 136 ntBASIC7.2□□□□□ -1.26
COL1A1P02452 RPL36P18-201ENST00000419316 318 ntBASIC7.2□□□□□ -1.26
COL1A1P02452 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL1A1P02452 AC002504.1-201ENST00000438281 691 ntBASIC7.2□□□□□ -1.26
COL1A1P02452 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL1A1P02452 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL1A1P02452 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.2□□□□□ -1.26
COL1A1P02452 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.2□□□□□ -1.26
COL1A1P02452 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC7.2□□□□□ -1.26
COL1A1P02452 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC7.2□□□□□ -1.26
COL1A1P02452 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.2□□□□□ -1.26
COL1A1P02452 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL1A1P02452 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL1A1P02452 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL1A1P02452 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL1A1P02452 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms