Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 BNIP3P41-202ENST00000616656 861 ntBASIC5.93□□□□□ -1.46
PDLIM1O00151 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.93□□□□□ -1.46
PDLIM1O00151 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM1O00151 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM1O00151 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
PDLIM1O00151 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM1O00151 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM1O00151 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM1O00151 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM1O00151 AL132656.3-201ENST00000606384 1595 ntBASIC5.93□□□□□ -1.46
PDLIM1O00151 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
PDLIM1O00151 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.93□□□□□ -1.46
PDLIM1O00151 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.93□□□□□ -1.46
PDLIM1O00151 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
PDLIM1O00151 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
PDLIM1O00151 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.92□□□□□ -1.46
PDLIM1O00151 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM1O00151 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM1O00151 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM1O00151 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM1O00151 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM1O00151 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM1O00151 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.92□□□□□ -1.46
PDLIM1O00151 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM1O00151 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM1O00151 RN7SKP77-201ENST00000363261 353 ntBASIC5.92□□□□□ -1.46
PDLIM1O00151 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM1O00151 RPL23AP85-201ENST00000421838 433 ntBASIC5.92□□□□□ -1.46
PDLIM1O00151 AL589794.1-201ENST00000424971 390 ntBASIC5.92□□□□□ -1.46
PDLIM1O00151 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM1O00151 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.92□□□□□ -1.46
PDLIM1O00151 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.92□□□□□ -1.46
PDLIM1O00151 PPIAP32-201ENST00000449940 472 ntBASIC5.92□□□□□ -1.46
PDLIM1O00151 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.92□□□□□ -1.46
PDLIM1O00151 AC069304.1-201ENST00000491593 704 ntBASIC5.92□□□□□ -1.46
PDLIM1O00151 RPL5P14-201ENST00000494197 878 ntBASIC5.92□□□□□ -1.46
PDLIM1O00151 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PDLIM1O00151 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM1O00151 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.92□□□□□ -1.46
PDLIM1O00151 IGKV1D-22-201ENST00000518953 324 ntBASIC5.92□□□□□ -1.46
PDLIM1O00151 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.92□□□□□ -1.46
PDLIM1O00151 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.92□□□□□ -1.46
PDLIM1O00151 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM1O00151 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.92□□□□□ -1.46
PDLIM1O00151 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.92□□□□□ -1.46
PDLIM1O00151 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.92□□□□□ -1.46
PDLIM1O00151 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM1O00151 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.92□□□□□ -1.46
PDLIM1O00151 HMGN1P26-201ENST00000558737 303 ntBASIC5.92□□□□□ -1.46
PDLIM1O00151 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.92□□□□□ -1.46
PDLIM1O00151 AP005262.1-201ENST00000582646 997 ntBASIC5.92□□□□□ -1.46
PDLIM1O00151 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.92□□□□□ -1.46
PDLIM1O00151 AC091133.5-201ENST00000603088 301 ntBASIC5.92□□□□□ -1.46
PDLIM1O00151 AL137246.1-201ENST00000607072 977 ntBASIC5.92□□□□□ -1.46
PDLIM1O00151 AC027559.1-201ENST00000636288 271 ntBASIC5.92□□□□□ -1.46
PDLIM1O00151 AC116667.2-201ENST00000641075 823 ntBASIC5.92□□□□□ -1.46
PDLIM1O00151 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM1O00151 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM1O00151 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
PDLIM1O00151 OR4G1P-202ENST00000641173 1788 ntBASIC5.92□□□□□ -1.46
PDLIM1O00151 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM1O00151 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM1O00151 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM1O00151 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM1O00151 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.92□□□□□ -1.46
PDLIM1O00151 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM1O00151 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM1O00151 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM1O00151 AC114876.1-201ENST00000490962 1366 ntBASIC5.92□□□□□ -1.46
PDLIM1O00151 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM1O00151 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM1O00151 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PDLIM1O00151 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
PDLIM1O00151 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM1O00151 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM1O00151 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.91□□□□□ -1.46
PDLIM1O00151 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM1O00151 AC009962.1-201ENST00000567327 3813 ntBASIC5.91□□□□□ -1.46
PDLIM1O00151 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
PDLIM1O00151 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM1O00151 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
PDLIM1O00151 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
PDLIM1O00151 RNA5SP321-201ENST00000362722 111 ntBASIC5.91□□□□□ -1.46
PDLIM1O00151 U3.10-201ENST00000364459 214 ntBASIC5.91□□□□□ -1.46
PDLIM1O00151 RPL5P20-201ENST00000403848 896 ntBASIC5.91□□□□□ -1.46
PDLIM1O00151 MIR1266-201ENST00000408125 84 ntBASIC5.91□□□□□ -1.46
PDLIM1O00151 RN7SKP151-201ENST00000410230 316 ntBASIC5.91□□□□□ -1.46
PDLIM1O00151 RN7SKP129-201ENST00000410288 299 ntBASIC5.91□□□□□ -1.46
PDLIM1O00151 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.91□□□□□ -1.46
PDLIM1O00151 AC016027.5-201ENST00000427227 210 ntBASIC5.91□□□□□ -1.46
PDLIM1O00151 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.91□□□□□ -1.46
PDLIM1O00151 USP24P1-201ENST00000433802 779 ntBASIC5.91□□□□□ -1.46
PDLIM1O00151 MED28P3-201ENST00000444288 531 ntBASIC5.91□□□□□ -1.46
PDLIM1O00151 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.91□□□□□ -1.46
PDLIM1O00151 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.91□□□□□ -1.46
PDLIM1O00151 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.91□□□□□ -1.46
PDLIM1O00151 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.91□□□□□ -1.46
PDLIM1O00151 RPL12P24-201ENST00000474907 486 ntBASIC5.91□□□□□ -1.46
PDLIM1O00151 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM1O00151 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms