Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC073581.1-201ENST00000519036 575 ntBASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 IGHV3-57-201ENST00000520143 280 ntBASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 TOMM20P1-201ENST00000534518 427 ntBASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 AC008147.3-201ENST00000548666 354 ntBASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 AL445383.1-201ENST00000554689 874 ntBASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 NDUFA5P11-201ENST00000567995 343 ntBASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 ANP32BP1-202ENST00000568553 737 ntBASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 AC025283.1-201ENST00000572039 734 ntBASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 RN7SL339P-201ENST00000580597 296 ntBASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 DYNLL1P1-201ENST00000595442 269 ntBASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 AC004801.6-201ENST00000616571 978 ntBASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 AC012653.2-201ENST00000621880 420 ntBASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 AC006328.2-201ENST00000623198 397 ntBASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 AC012005.2-201ENST00000624333 397 ntBASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 AC013488.1-201ENST00000526618 1838 ntBASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 RNA5SP188-201ENST00000362916 129 ntBASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 AL590635.1-201ENST00000406314 586 ntBASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 GAPDHP75-201ENST00000433910 943 ntBASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 RPSAP40-201ENST00000442343 891 ntBASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 AC245517.2-201ENST00000442890 346 ntBASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 RPL26P30-201ENST00000453533 435 ntBASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 AC105918.1-201ENST00000474399 838 ntBASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 AC099340.1-201ENST00000475247 599 ntBASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 RPS27P20-201ENST00000492051 246 ntBASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 SNORA58-201ENST00000505219 137 ntBASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 AL390198.2-201ENST00000510553 222 ntBASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 IGLV3-6-201ENST00000523937 250 ntBASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 AC005519.1-201ENST00000554490 601 ntBASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 AC025171.4-201ENST00000607250 1047 ntBASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 AL139384.2-201ENST00000613809 3590 ntBASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHB1Q9Y5F3 TCP1P3-201ENST00000414406 1498 ntBASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms