Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 AL355834.1-201ENST00000556602 3965 ntBASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 RN7SKP186-201ENST00000365371 303 ntBASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 AL445238.1-204ENST00000400311 463 ntBASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 RPL21P50-201ENST00000417698 477 ntBASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 AC002127.1-201ENST00000421305 225 ntBASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 RPL7AP14-201ENST00000424041 802 ntBASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 MGAT2P2-201ENST00000427194 797 ntBASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 AC016027.5-201ENST00000427227 210 ntBASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 AC092601.1-201ENST00000444526 383 ntBASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 RBMY2AP-201ENST00000445405 1157 ntBASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 RBMY2CP-201ENST00000448575 1157 ntBASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 RBMY2DP-202ENST00000448881 1157 ntBASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 RN7SL643P-201ENST00000471845 291 ntBASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 AC091544.1-201ENST00000484702 348 ntBASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 CR383656.1-201ENST00000484916 377 ntBASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 GM2AP2-201ENST00000491764 562 ntBASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 RNA5SP400-201ENST00000517155 111 ntBASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 AC113191.1-201ENST00000517759 403 ntBASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 AC135983.3-201ENST00000528049 1226 ntBASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 OR6M2P-201ENST00000529831 871 ntBASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 RPA2P3-201ENST00000533268 770 ntBASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 AC008126.1-201ENST00000549019 480 ntBASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 LINC00556-201ENST00000569603 412 ntBASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 OR7E91P-202ENST00000642062 1198 ntBASIC5.4□□□□□ -1.54
RHBDD3Q9Y3P4 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RHBDD3Q9Y3P4 AL161912.4-201ENST00000623889 2468 ntBASIC5.4□□□□□ -1.55
RHBDD3Q9Y3P4 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
RHBDD3Q9Y3P4 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RHBDD3Q9Y3P4 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
RHBDD3Q9Y3P4 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
RHBDD3Q9Y3P4 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RHBDD3Q9Y3P4 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
RHBDD3Q9Y3P4 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RHBDD3Q9Y3P4 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.4□□□□□ -1.55
RHBDD3Q9Y3P4 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 AL121839.2-201ENST00000565058 6943 ntBASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 DHFRP2-201ENST00000414224 547 ntBASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 AL360013.1-201ENST00000419031 858 ntBASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 AC021876.1-201ENST00000425959 359 ntBASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 AC245884.2-201ENST00000426257 404 ntBASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 GAPDHP19-201ENST00000431768 1005 ntBASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 EMC3-AS1-205ENST00000438698 534 ntBASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 MORF4-201ENST00000447135 971 ntBASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 RPL7L1P3-201ENST00000455249 689 ntBASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 RN7SL39P-201ENST00000462264 297 ntBASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 RN7SL369P-201ENST00000477138 299 ntBASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 CYP4F27P-201ENST00000514557 494 ntBASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms