Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 MIR130B-202ENST00000385018 82 ntBASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 LDHAP2-201ENST00000437325 985 ntBASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 AL353662.1-201ENST00000439099 327 ntBASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 RPL12P11-201ENST00000439970 501 ntBASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 AC144530.1-201ENST00000452862 555 ntBASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 RANP2-201ENST00000456833 229 ntBASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 SNX18P26-201ENST00000458433 740 ntBASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 CYCSP38-201ENST00000559840 322 ntBASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 AC008507.3-201ENST00000585753 472 ntBASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 AL138895.2-201ENST00000603019 178 ntBASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 AL136097.3-201ENST00000611097 505 ntBASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 AC004801.6-201ENST00000616571 978 ntBASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 AL512652.1-201ENST00000619006 500 ntBASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 AP001157.1-201ENST00000550837 2339 ntBASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 BX284613.1-201ENST00000452221 1641 ntBASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CLIP2Q9UDT6 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 OR2W4P-201ENST00000406496 926 ntBASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 AC079807.1-201ENST00000429993 481 ntBASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 AC023194.2-201ENST00000465398 406 ntBASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 AC098847.1-201ENST00000473094 348 ntBASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 AL158068.1-201ENST00000506116 616 ntBASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 AC090958.1-201ENST00000511122 351 ntBASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 AC027369.2-201ENST00000528030 440 ntBASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 AC079905.1-201ENST00000549280 475 ntBASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 MIR4310-201ENST00000582950 57 ntBASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 AC024589.2-201ENST00000605642 1294 ntBASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 AL352984.2-202ENST00000613699 155 ntBASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 AC022400.9-201ENST00000623633 273 ntBASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.29□□□□□ -1.24
CLIP2Q9UDT6 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 BIN2P1-201ENST00000504996 1530 ntBASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 AL353763.1-201ENST00000624467 1628 ntBASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 SNORA21-201ENST00000362423 132 ntBASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 RN7SKP15-201ENST00000364742 309 ntBASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 AL445238.1-204ENST00000400311 463 ntBASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 UBE2V1P14-201ENST00000415815 558 ntBASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 AC130360.1-201ENST00000425489 1117 ntBASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 AC245884.2-201ENST00000426257 404 ntBASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 RPL34P27-201ENST00000428810 349 ntBASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 HSPE1P27-201ENST00000430808 296 ntBASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 ATP5LP2-201ENST00000440646 311 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms