Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 AP005119.1-201ENST00000580956 292 ntBASIC6.42□□□□□ -1.38
SIX2Q9NPC8 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 AC124916.2-201ENST00000604416 224 ntBASIC6.42□□□□□ -1.38
SIX2Q9NPC8 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 AC021422.1-201ENST00000621212 473 ntBASIC6.42□□□□□ -1.38
SIX2Q9NPC8 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 KYNUP3-201ENST00000574386 1341 ntBASIC6.42□□□□□ -1.38
SIX2Q9NPC8 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 GNL2P1-201ENST00000451274 2190 ntBASIC6.41□□□□□ -1.38
SIX2Q9NPC8 MTCO1P28-201ENST00000574177 1528 ntBASIC6.41□□□□□ -1.38
SIX2Q9NPC8 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 RN7SKP184-201ENST00000362348 333 ntBASIC6.41□□□□□ -1.38
SIX2Q9NPC8 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 AC121334.1-201ENST00000396414 802 ntBASIC6.41□□□□□ -1.38
SIX2Q9NPC8 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 RPL7AP14-201ENST00000424041 802 ntBASIC6.41□□□□□ -1.38
SIX2Q9NPC8 AL139158.1-201ENST00000424719 340 ntBASIC6.41□□□□□ -1.38
SIX2Q9NPC8 AC021876.1-201ENST00000425959 359 ntBASIC6.41□□□□□ -1.38
SIX2Q9NPC8 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 AL445466.1-201ENST00000448432 357 ntBASIC6.41□□□□□ -1.38
SIX2Q9NPC8 AC044810.1-201ENST00000480271 711 ntBASIC6.41□□□□□ -1.38
SIX2Q9NPC8 BLNK-209ENST00000495266 440 ntTSL 5 BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 AC126615.2-201ENST00000553003 515 ntBASIC6.41□□□□□ -1.38
SIX2Q9NPC8 AC138207.8-204ENST00000579588 527 ntBASIC6.41□□□□□ -1.38
SIX2Q9NPC8 RN7SL230P-201ENST00000580835 303 ntBASIC6.41□□□□□ -1.38
SIX2Q9NPC8 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 AP001267.4-201ENST00000602598 545 ntBASIC6.41□□□□□ -1.38
SIX2Q9NPC8 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 AL138960.1-201ENST00000613838 513 ntBASIC6.41□□□□□ -1.38
SIX2Q9NPC8 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 AC099654.15-201ENST00000639802 509 ntBASIC6.41□□□□□ -1.38
SIX2Q9NPC8 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SIX2Q9NPC8 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SIX2Q9NPC8 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
SIX2Q9NPC8 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
SIX2Q9NPC8 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
SIX2Q9NPC8 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
SIX2Q9NPC8 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SIX2Q9NPC8 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
SIX2Q9NPC8 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SIX2Q9NPC8 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.4□□□□□ -1.38
SIX2Q9NPC8 SNORA51.9-201ENST00000384295 124 ntBASIC6.4□□□□□ -1.38
SIX2Q9NPC8 MIR130B-202ENST00000385018 82 ntBASIC6.4□□□□□ -1.38
SIX2Q9NPC8 RBBP4P5-201ENST00000398583 1266 ntBASIC6.4□□□□□ -1.38
SIX2Q9NPC8 GCNT1P4-201ENST00000404096 329 ntBASIC6.4□□□□□ -1.38
SIX2Q9NPC8 RN7SKP86-201ENST00000410454 332 ntBASIC6.4□□□□□ -1.38
SIX2Q9NPC8 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.4□□□□□ -1.38
SIX2Q9NPC8 KIF4CP-201ENST00000422742 1279 ntBASIC6.4□□□□□ -1.38
SIX2Q9NPC8 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.4□□□□□ -1.38
SIX2Q9NPC8 AC099677.3-201ENST00000427081 395 ntBASIC6.4□□□□□ -1.38
SIX2Q9NPC8 AL354893.1-201ENST00000433735 348 ntBASIC6.4□□□□□ -1.38
SIX2Q9NPC8 AL445928.1-201ENST00000435545 222 ntBASIC6.4□□□□□ -1.38
SIX2Q9NPC8 AL663074.2-201ENST00000440621 479 ntBASIC6.4□□□□□ -1.38
SIX2Q9NPC8 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.4□□□□□ -1.38
SIX2Q9NPC8 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.4□□□□□ -1.38
SIX2Q9NPC8 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SIX2Q9NPC8 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.4□□□□□ -1.38
SIX2Q9NPC8 RN7SL254P-201ENST00000460609 284 ntBASIC6.4□□□□□ -1.38
SIX2Q9NPC8 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 150.2 ms