Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 MAPK10-270ENST00000641102 3538 ntBASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 AC062022.1-201ENST00000451026 1684 ntBASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 SNORD8-201ENST00000363915 110 ntBASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 RNU1-46P-201ENST00000384425 164 ntBASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 RN7SKP268-201ENST00000411107 316 ntBASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 TMA16P2-201ENST00000413187 601 ntBASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 TRIM60P17-201ENST00000415181 719 ntBASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 AL590128.1-201ENST00000433407 286 ntBASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 AC009237.1-201ENST00000442127 744 ntBASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 ST13P21-201ENST00000453250 1098 ntBASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 OR51A1P-201ENST00000511110 946 ntBASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 AC138517.1-201ENST00000515724 568 ntBASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 AP001804.1-201ENST00000526868 919 ntBASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 PPIAP6-201ENST00000557078 499 ntBASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 AL132657.2-201ENST00000564417 358 ntBASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 AC106730.2-201ENST00000566641 540 ntBASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 RN7SL270P-201ENST00000579643 281 ntBASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 DIMT1P1-201ENST00000603970 763 ntBASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 AL157899.1-201ENST00000604110 936 ntBASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 AL590032.1-201ENST00000604920 252 ntBASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 HMGB1P51-201ENST00000605166 638 ntBASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 AC004775.1-201ENST00000607389 753 ntBASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 AC004241.2-201ENST00000614562 444 ntBASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 AC140479.4-205ENST00000636339 820 ntBASIC6.15□□□□□ -1.42
AMBRA1Q9C0C7 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
AMBRA1Q9C0C7 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
AMBRA1Q9C0C7 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.15□□□□□ -1.43
AMBRA1Q9C0C7 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
AMBRA1Q9C0C7 OR2A3P-202ENST00000641249 1776 ntBASIC6.15□□□□□ -1.43
AMBRA1Q9C0C7 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.43
AMBRA1Q9C0C7 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
AMBRA1Q9C0C7 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
AMBRA1Q9C0C7 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
AMBRA1Q9C0C7 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
AMBRA1Q9C0C7 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
AMBRA1Q9C0C7 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.15□□□□□ -1.43
AMBRA1Q9C0C7 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
AMBRA1Q9C0C7 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.15□□□□□ -1.43
AMBRA1Q9C0C7 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
AMBRA1Q9C0C7 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 AL157831.2-201ENST00000564681 3095 ntBASIC6.14□□□□□ -1.43
AMBRA1Q9C0C7 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms