Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RFT1Q96AA3 SAMM50P1-201ENST00000455403 1399 ntBASIC5.53□□□□□ -1.52
RFT1Q96AA3 AL355488.2-201ENST00000609909 2850 ntBASIC5.53□□□□□ -1.52
RFT1Q96AA3 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
RFT1Q96AA3 AC074141.1-201ENST00000588129 2995 ntBASIC5.52□□□□□ -1.53
RFT1Q96AA3 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.52□□□□□ -1.53
RFT1Q96AA3 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
RFT1Q96AA3 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
RFT1Q96AA3 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RFT1Q96AA3 AC006484.1-201ENST00000435086 1884 ntBASIC5.52□□□□□ -1.53
RFT1Q96AA3 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RFT1Q96AA3 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
RFT1Q96AA3 PPIAP24-201ENST00000328558 471 ntBASIC5.52□□□□□ -1.53
RFT1Q96AA3 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RFT1Q96AA3 Y_RNA.62-201ENST00000362840 99 ntBASIC5.52□□□□□ -1.53
RFT1Q96AA3 RNA5SP302-201ENST00000364896 100 ntBASIC5.52□□□□□ -1.53
RFT1Q96AA3 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.52□□□□□ -1.53
RFT1Q96AA3 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
RFT1Q96AA3 AC007068.1-201ENST00000396690 844 ntBASIC5.52□□□□□ -1.53
RFT1Q96AA3 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.52□□□□□ -1.53
RFT1Q96AA3 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.52□□□□□ -1.53
RFT1Q96AA3 RPL12P23-201ENST00000405880 490 ntBASIC5.52□□□□□ -1.53
RFT1Q96AA3 CBX1P3-201ENST00000413296 527 ntBASIC5.52□□□□□ -1.53
RFT1Q96AA3 MRPS21P5-201ENST00000417885 231 ntBASIC5.52□□□□□ -1.53
RFT1Q96AA3 AL161742.1-201ENST00000418154 584 ntBASIC5.52□□□□□ -1.53
RFT1Q96AA3 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.52□□□□□ -1.53
RFT1Q96AA3 RPL12P43-201ENST00000420608 499 ntBASIC5.52□□□□□ -1.53
RFT1Q96AA3 RPL23AP85-201ENST00000421838 433 ntBASIC5.52□□□□□ -1.53
RFT1Q96AA3 AL672212.1-201ENST00000422246 400 ntBASIC5.52□□□□□ -1.53
RFT1Q96AA3 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.52□□□□□ -1.53
RFT1Q96AA3 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.52□□□□□ -1.53
RFT1Q96AA3 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.52□□□□□ -1.53
RFT1Q96AA3 AL121578.2-201ENST00000448797 447 ntBASIC5.52□□□□□ -1.53
RFT1Q96AA3 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.52□□□□□ -1.53
RFT1Q96AA3 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.52□□□□□ -1.53
RFT1Q96AA3 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.52□□□□□ -1.53
RFT1Q96AA3 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
RFT1Q96AA3 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.52□□□□□ -1.53
RFT1Q96AA3 MED31-202ENST00000574128 619 ntTSL 3 BASIC5.52□□□□□ -1.53
RFT1Q96AA3 AC006120.1-201ENST00000579375 546 ntBASIC5.52□□□□□ -1.53
RFT1Q96AA3 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.52□□□□□ -1.53
RFT1Q96AA3 RPS4XP21-201ENST00000603814 750 ntBASIC5.52□□□□□ -1.53
RFT1Q96AA3 AC012511.1-201ENST00000608140 449 ntBASIC5.52□□□□□ -1.53
RFT1Q96AA3 AC073389.3-201ENST00000609434 935 ntBASIC5.52□□□□□ -1.53
RFT1Q96AA3 Z95327.3-201ENST00000610385 572 ntBASIC5.52□□□□□ -1.53
RFT1Q96AA3 MIR8082-201ENST00000612488 81 ntBASIC5.52□□□□□ -1.53
RFT1Q96AA3 AC005514.1-201ENST00000623521 208 ntBASIC5.52□□□□□ -1.53
RFT1Q96AA3 AC117503.3-201ENST00000623811 601 ntBASIC5.52□□□□□ -1.53
RFT1Q96AA3 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.52□□□□□ -1.53
RFT1Q96AA3 AC006453.3-201ENST00000635891 377 ntBASIC5.52□□□□□ -1.53
RFT1Q96AA3 AL121768.1-201ENST00000613917 2544 ntBASIC5.52□□□□□ -1.53
RFT1Q96AA3 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.52□□□□□ -1.53
RFT1Q96AA3 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
RFT1Q96AA3 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
RFT1Q96AA3 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
RFT1Q96AA3 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
RFT1Q96AA3 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RFT1Q96AA3 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RFT1Q96AA3 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RFT1Q96AA3 AC092451.3-201ENST00000625067 1343 ntBASIC5.51□□□□□ -1.53
RFT1Q96AA3 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RFT1Q96AA3 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RFT1Q96AA3 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 OR7E25P-201ENST00000344844 931 ntBASIC5.51□□□□□ -1.53
RFT1Q96AA3 SNORD1C-201ENST00000363315 78 ntBASIC5.51□□□□□ -1.53
RFT1Q96AA3 RN7SKP191-201ENST00000364713 306 ntBASIC5.51□□□□□ -1.53
RFT1Q96AA3 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 AL139135.1-201ENST00000412675 209 ntBASIC5.51□□□□□ -1.53
RFT1Q96AA3 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 AL138479.1-201ENST00000426913 484 ntBASIC5.51□□□□□ -1.53
RFT1Q96AA3 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 RPS7P4-201ENST00000444127 582 ntBASIC5.51□□□□□ -1.53
RFT1Q96AA3 UBBP5-201ENST00000446970 266 ntBASIC5.51□□□□□ -1.53
RFT1Q96AA3 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RFT1Q96AA3 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RFT1Q96AA3 RPS27AP3-201ENST00000453803 454 ntBASIC5.51□□□□□ -1.53
RFT1Q96AA3 Z83838.1-202ENST00000456225 839 ntBASIC5.51□□□□□ -1.53
RFT1Q96AA3 RN7SKP198-201ENST00000459286 306 ntBASIC5.51□□□□□ -1.53
RFT1Q96AA3 AC090602.1-201ENST00000469695 252 ntBASIC5.51□□□□□ -1.53
RFT1Q96AA3 SEPT7P6-201ENST00000469999 1143 ntBASIC5.51□□□□□ -1.53
RFT1Q96AA3 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 AC117500.1-201ENST00000497352 755 ntBASIC5.51□□□□□ -1.53
RFT1Q96AA3 SCARNA5-201ENST00000516201 276 ntBASIC5.51□□□□□ -1.53
RFT1Q96AA3 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 IGKV1D-22-201ENST00000518953 324 ntBASIC5.51□□□□□ -1.53
RFT1Q96AA3 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 AC136777.2-201ENST00000522979 358 ntBASIC5.51□□□□□ -1.53
RFT1Q96AA3 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RFT1Q96AA3 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.51□□□□□ -1.53
RFT1Q96AA3 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms