Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.74□□□□□ -1.49
PTP4A1Q93096 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.74□□□□□ -1.49
PTP4A1Q93096 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PTP4A1Q93096 AC096921.2-201ENST00000561507 1916 ntBASIC5.74□□□□□ -1.49
PTP4A1Q93096 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PTP4A1Q93096 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
PTP4A1Q93096 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PTP4A1Q93096 AL356317.1-201ENST00000396110 1436 ntBASIC5.74□□□□□ -1.49
PTP4A1Q93096 RBPJP6-201ENST00000411556 1431 ntBASIC5.74□□□□□ -1.49
PTP4A1Q93096 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PTP4A1Q93096 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PTP4A1Q93096 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 AC097461.1-201ENST00000568928 2821 ntBASIC5.73□□□□□ -1.49
PTP4A1Q93096 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PTP4A1Q93096 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PTP4A1Q93096 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PTP4A1Q93096 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PTP4A1Q93096 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PTP4A1Q93096 RNA5SP140-201ENST00000364524 92 ntBASIC5.73□□□□□ -1.49
PTP4A1Q93096 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PTP4A1Q93096 AC026310.1-201ENST00000396004 378 ntBASIC5.73□□□□□ -1.49
PTP4A1Q93096 PEX12P1-201ENST00000400284 1048 ntBASIC5.73□□□□□ -1.49
PTP4A1Q93096 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 TRIM60P17-201ENST00000415181 719 ntBASIC5.73□□□□□ -1.49
PTP4A1Q93096 UBE2V1P14-201ENST00000415815 558 ntBASIC5.73□□□□□ -1.49
PTP4A1Q93096 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.73□□□□□ -1.49
PTP4A1Q93096 E2F6P1-201ENST00000428850 745 ntBASIC5.73□□□□□ -1.49
PTP4A1Q93096 E2F6P3-201ENST00000441743 743 ntBASIC5.73□□□□□ -1.49
PTP4A1Q93096 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PTP4A1Q93096 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 SLC25A51P1-201ENST00000468432 871 ntBASIC5.73□□□□□ -1.49
PTP4A1Q93096 AC105918.1-201ENST00000474399 838 ntBASIC5.73□□□□□ -1.49
PTP4A1Q93096 RN7SL655P-201ENST00000486087 298 ntBASIC5.73□□□□□ -1.49
PTP4A1Q93096 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.73□□□□□ -1.49
PTP4A1Q93096 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 CASP1P2-201ENST00000526830 1258 ntBASIC5.73□□□□□ -1.49
PTP4A1Q93096 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 AC026956.1-201ENST00000558741 396 ntBASIC5.73□□□□□ -1.49
PTP4A1Q93096 OR4H6P-201ENST00000563771 921 ntBASIC5.73□□□□□ -1.49
PTP4A1Q93096 AC122134.1-201ENST00000565664 1104 ntBASIC5.73□□□□□ -1.49
PTP4A1Q93096 AC092718.4-201ENST00000566639 716 ntBASIC5.73□□□□□ -1.49
PTP4A1Q93096 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 AC019257.2-201ENST00000605539 497 ntBASIC5.73□□□□□ -1.49
PTP4A1Q93096 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 AL008723.3-201ENST00000608926 449 ntBASIC5.73□□□□□ -1.49
PTP4A1Q93096 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 AC005514.1-201ENST00000623521 208 ntBASIC5.73□□□□□ -1.49
PTP4A1Q93096 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 AC135068.11-201ENST00000636378 921 ntBASIC5.73□□□□□ -1.49
PTP4A1Q93096 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PTP4A1Q93096 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PTP4A1Q93096 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PTP4A1Q93096 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PTP4A1Q93096 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PTP4A1Q93096 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PTP4A1Q93096 GUCY1B2-204ENST00000531898 1979 ntBASIC5.73□□□□□ -1.49
PTP4A1Q93096 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.73□□□□□ -1.49
PTP4A1Q93096 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
PTP4A1Q93096 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.72□□□□□ -1.49
PTP4A1Q93096 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
PTP4A1Q93096 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTP4A1Q93096 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTP4A1Q93096 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.72□□□□□ -1.49
PTP4A1Q93096 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.72□□□□□ -1.49
PTP4A1Q93096 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTP4A1Q93096 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.72□□□□□ -1.49
PTP4A1Q93096 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTP4A1Q93096 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.72□□□□□ -1.49
PTP4A1Q93096 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.72□□□□□ -1.49
PTP4A1Q93096 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.72□□□□□ -1.49
PTP4A1Q93096 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.72□□□□□ -1.49
PTP4A1Q93096 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PTP4A1Q93096 MRPS6P2-201ENST00000381143 370 ntBASIC5.72□□□□□ -1.49
PTP4A1Q93096 AC019178.1-201ENST00000392337 440 ntBASIC5.72□□□□□ -1.49
PTP4A1Q93096 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.72□□□□□ -1.49
PTP4A1Q93096 DSTNP5-201ENST00000427921 523 ntBASIC5.72□□□□□ -1.49
PTP4A1Q93096 UBE2V2P3-201ENST00000433562 437 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms