Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 AL731532.1-201ENST00000623972 4236 ntBASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 AC011455.2-201ENST00000599320 3336 ntBASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 FANCD2P2-201ENST00000437591 1400 ntBASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 AP005432.1-201ENST00000580891 3485 ntBASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 AC092724.1-201ENST00000624623 3397 ntBASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 RLIMP2-201ENST00000427891 1563 ntBASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 FUNDC2P3-201ENST00000334716 533 ntBASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 MRPS6P2-201ENST00000381143 370 ntBASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 RNU6-1320P-201ENST00000390838 107 ntBASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 RNU6-1269P-201ENST00000391139 107 ntBASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 RN7SKP281-201ENST00000410472 352 ntBASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 AL445213.1-201ENST00000412589 747 ntBASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 AL589794.1-201ENST00000424971 390 ntBASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 AC007563.3-201ENST00000433233 371 ntBASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 PSMD8P1-201ENST00000436275 769 ntBASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 HMGN1P32-201ENST00000441744 256 ntBASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 AC092967.1-201ENST00000449016 481 ntBASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 RNU6-599P-201ENST00000459383 107 ntBASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 RNU6-1193P-201ENST00000459461 107 ntBASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 RN7SL165P-201ENST00000477476 291 ntBASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 HMGB1P47-201ENST00000511281 589 ntBASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 SUMO2P19-201ENST00000518920 295 ntBASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 IGKV1D-22-201ENST00000518953 324 ntBASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 AC022826.1-201ENST00000519383 805 ntBASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 BMS1P7-201ENST00000602440 1052 ntBASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 RNU6-368P-201ENST00000620928 107 ntBASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 RNU6-538P-201ENST00000622329 107 ntBASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.65□□□□□ -1.5
LINC00346Q8IVM7 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
LINC00346Q8IVM7 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.65□□□□□ -1.51
LINC00346Q8IVM7 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LINC00346Q8IVM7 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LINC00346Q8IVM7 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LINC00346Q8IVM7 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LINC00346Q8IVM7 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LINC00346Q8IVM7 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LINC00346Q8IVM7 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.51
LINC00346Q8IVM7 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
LINC00346Q8IVM7 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LINC00346Q8IVM7 AC067942.1-201ENST00000488045 1493 ntBASIC5.64□□□□□ -1.51
LINC00346Q8IVM7 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.64□□□□□ -1.51
LINC00346Q8IVM7 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LINC00346Q8IVM7 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
LINC00346Q8IVM7 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.64□□□□□ -1.51
LINC00346Q8IVM7 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LINC00346Q8IVM7 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
LINC00346Q8IVM7 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LINC00346Q8IVM7 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LINC00346Q8IVM7 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LINC00346Q8IVM7 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
LINC00346Q8IVM7 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LINC00346Q8IVM7 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LINC00346Q8IVM7 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LINC00346Q8IVM7 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms