Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.68□□□□□ -1.5
SHFQ7M4L6 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.68□□□□□ -1.5
SHFQ7M4L6 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC5.68□□□□□ -1.5
SHFQ7M4L6 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.68□□□□□ -1.5
SHFQ7M4L6 AC117525.1-201ENST00000515228 503 ntBASIC5.68□□□□□ -1.5
SHFQ7M4L6 KCTD9P6-201ENST00000522306 950 ntBASIC5.68□□□□□ -1.5
SHFQ7M4L6 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
SHFQ7M4L6 CR383656.14-201ENST00000551951 406 ntBASIC5.68□□□□□ -1.5
SHFQ7M4L6 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC5.68□□□□□ -1.5
SHFQ7M4L6 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.68□□□□□ -1.5
SHFQ7M4L6 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.68□□□□□ -1.5
SHFQ7M4L6 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.68□□□□□ -1.5
SHFQ7M4L6 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.68□□□□□ -1.5
SHFQ7M4L6 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.68□□□□□ -1.5
SHFQ7M4L6 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.68□□□□□ -1.5
SHFQ7M4L6 RN7SL131P-201ENST00000579043 256 ntBASIC5.68□□□□□ -1.5
SHFQ7M4L6 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.68□□□□□ -1.5
SHFQ7M4L6 AC012175.1-201ENST00000603755 531 ntBASIC5.68□□□□□ -1.5
SHFQ7M4L6 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC5.68□□□□□ -1.5
SHFQ7M4L6 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHFQ7M4L6 AC005514.1-201ENST00000623521 208 ntBASIC5.68□□□□□ -1.5
SHFQ7M4L6 AP003108.4-201ENST00000623917 878 ntBASIC5.68□□□□□ -1.5
SHFQ7M4L6 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHFQ7M4L6 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SHFQ7M4L6 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHFQ7M4L6 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHFQ7M4L6 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHFQ7M4L6 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHFQ7M4L6 AP001541.1-201ENST00000623322 1904 ntBASIC5.68□□□□□ -1.5
SHFQ7M4L6 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHFQ7M4L6 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.68□□□□□ -1.5
SHFQ7M4L6 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SHFQ7M4L6 AC010132.4-201ENST00000569883 1368 ntBASIC5.67□□□□□ -1.5
SHFQ7M4L6 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SHFQ7M4L6 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHFQ7M4L6 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHFQ7M4L6 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHFQ7M4L6 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 RNA5SP140-201ENST00000364524 92 ntBASIC5.67□□□□□ -1.5
SHFQ7M4L6 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 U3.52-201ENST00000384034 216 ntBASIC5.67□□□□□ -1.5
SHFQ7M4L6 RNU6-1176P-201ENST00000390955 107 ntBASIC5.67□□□□□ -1.5
SHFQ7M4L6 RNU11-6P-201ENST00000391127 133 ntBASIC5.67□□□□□ -1.5
SHFQ7M4L6 RNA5SP35-201ENST00000391257 129 ntBASIC5.67□□□□□ -1.5
SHFQ7M4L6 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 MRPS33P4-201ENST00000434892 317 ntBASIC5.67□□□□□ -1.5
SHFQ7M4L6 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 AL121578.2-201ENST00000448797 447 ntBASIC5.67□□□□□ -1.5
SHFQ7M4L6 MTND5P8-201ENST00000449817 1083 ntBASIC5.67□□□□□ -1.5
SHFQ7M4L6 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 RBMY2EP-202ENST00000456360 940 ntBASIC5.67□□□□□ -1.5
SHFQ7M4L6 AL445687.2-201ENST00000458156 728 ntBASIC5.67□□□□□ -1.5
SHFQ7M4L6 AL355032.1-201ENST00000472981 438 ntBASIC5.67□□□□□ -1.5
SHFQ7M4L6 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 COX6B1P4-201ENST00000519826 484 ntBASIC5.67□□□□□ -1.5
SHFQ7M4L6 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.67□□□□□ -1.5
SHFQ7M4L6 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 AC090651.1-201ENST00000567865 634 ntBASIC5.67□□□□□ -1.5
SHFQ7M4L6 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 AC091304.5-201ENST00000568969 158 ntBASIC5.67□□□□□ -1.5
SHFQ7M4L6 AC006120.1-201ENST00000579375 546 ntBASIC5.67□□□□□ -1.5
SHFQ7M4L6 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 AC098483.2-201ENST00000603158 454 ntBASIC5.67□□□□□ -1.5
SHFQ7M4L6 RPS4XP21-201ENST00000603814 750 ntBASIC5.67□□□□□ -1.5
SHFQ7M4L6 OR4H6P-202ENST00000603819 340 ntBASIC5.67□□□□□ -1.5
SHFQ7M4L6 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 AC106858.1-201ENST00000637497 429 ntBASIC5.67□□□□□ -1.5
SHFQ7M4L6 AC119674.1-220ENST00000641502 1048 ntBASIC5.67□□□□□ -1.5
SHFQ7M4L6 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHFQ7M4L6 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 AC137056.2-201ENST00000624055 1958 ntBASIC5.67□□□□□ -1.5
SHFQ7M4L6 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHFQ7M4L6 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SHFQ7M4L6 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SHFQ7M4L6 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms