Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
RFWD3Q6PCD5 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 COX6B1P3-201ENST00000312310 260 ntBASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 MIR130B-202ENST00000385018 82 ntBASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 OR3D1P-201ENST00000438288 955 ntBASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 AL353662.1-201ENST00000439099 327 ntBASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 RBBP4P1-201ENST00000502424 1276 ntBASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 AL158068.1-201ENST00000506116 616 ntBASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 SNORA81.2-201ENST00000516868 170 ntBASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 AC021269.1-201ENST00000526860 705 ntBASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 MIR3189-201ENST00000578735 73 ntBASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 MIR4420-201ENST00000583944 77 ntBASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 AP001437.1-201ENST00000608783 456 ntBASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 AC004801.6-201ENST00000616571 978 ntBASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 AC022726.2-201ENST00000634673 547 ntBASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 AC023632.6-201ENST00000624338 2177 ntBASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 HSPD1P9-201ENST00000420325 1636 ntBASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 ZNF101P1-201ENST00000435701 1720 ntBASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RFWD3Q6PCD5 AC024587.1-201ENST00000505925 2157 ntBASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 AL022323.4-201ENST00000623980 13120 ntBASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 AC123769.1-201ENST00000530992 3192 ntBASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 SNORA21-201ENST00000362423 132 ntBASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 RNU1-134P-201ENST00000362935 165 ntBASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 RNU6-316P-201ENST00000391027 107 ntBASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 AC021876.1-201ENST00000425959 359 ntBASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 HMGN1P2-201ENST00000445197 310 ntBASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 RBMY2AP-201ENST00000445405 1157 ntBASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 AC097463.1-201ENST00000447288 481 ntBASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 RBMY2CP-201ENST00000448575 1157 ntBASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 RBMY2DP-202ENST00000448881 1157 ntBASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 RBMY2BP-202ENST00000451071 1156 ntBASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 AC002553.3-201ENST00000453002 341 ntBASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 LDHAP1-201ENST00000509421 992 ntBASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 AC090958.1-201ENST00000511122 351 ntBASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 CR383658.1-201ENST00000514609 734 ntBASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 IGKV2-19-201ENST00000518132 283 ntBASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 AC093524.1-201ENST00000564266 1094 ntBASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 AC090826.1-203ENST00000569235 490 ntBASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 AC092266.1-201ENST00000610958 165 ntBASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 AL359742.1-201ENST00000622497 540 ntBASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 AC063952.1-203ENST00000634410 658 ntBASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RFWD3Q6PCD5 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms