Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 CUBNP3-201ENST00000457461 1784 ntBASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 OR2M1P-201ENST00000318104 951 ntBASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 AL035696.2-201ENST00000407941 709 ntBASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 AL713922.1-201ENST00000416477 747 ntBASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 AL445466.1-201ENST00000448432 357 ntBASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 HMGB3P14-201ENST00000494195 599 ntBASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 AC006924.1-201ENST00000610750 559 ntBASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 SDR42E1P1-201ENST00000611327 477 ntBASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 AP003789.1-201ENST00000617737 605 ntBASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 OR13C1P-202ENST00000641378 2919 ntBASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.09□□□□□ -1.44
LYSMD4Q5XG99 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
LYSMD4Q5XG99 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 AC005332.9-201ENST00000620266 2921 ntBASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 AC027088.4-201ENST00000611559 1947 ntBASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 AL391361.1-201ENST00000405580 489 ntBASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 GAPDHP75-201ENST00000433910 943 ntBASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 AP000281.1-201ENST00000444036 316 ntBASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 ZNF619P1-201ENST00000446539 752 ntBASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 SNORA58-201ENST00000505219 137 ntBASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 CYCSP22-201ENST00000517555 339 ntBASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 IGKV2-19-201ENST00000518132 283 ntBASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 AL136131.3-201ENST00000607600 188 ntBASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 AC116667.2-201ENST00000641075 823 ntBASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 AC027279.1-201ENST00000568885 4284 ntBASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.08□□□□□ -1.44
LYSMD4Q5XG99 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.07□□□□□ -1.44
LYSMD4Q5XG99 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LYSMD4Q5XG99 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LYSMD4Q5XG99 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LYSMD4Q5XG99 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.07□□□□□ -1.44
LYSMD4Q5XG99 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LYSMD4Q5XG99 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LYSMD4Q5XG99 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LYSMD4Q5XG99 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LYSMD4Q5XG99 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.07□□□□□ -1.44
LYSMD4Q5XG99 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LYSMD4Q5XG99 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
LYSMD4Q5XG99 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.07□□□□□ -1.44
LYSMD4Q5XG99 MIR375-201ENST00000362103 64 ntBASIC6.07□□□□□ -1.44
LYSMD4Q5XG99 RNA5SP478-201ENST00000364657 115 ntBASIC6.07□□□□□ -1.44
LYSMD4Q5XG99 SNORA43.1-201ENST00000364863 140 ntBASIC6.07□□□□□ -1.44
LYSMD4Q5XG99 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.07□□□□□ -1.44
LYSMD4Q5XG99 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 155.5 ms