Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCL20P78556 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCL20P78556 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCL20P78556 SNORA30B-201ENST00000365319 129 ntBASIC4.64□□□□□ -1.67
CCL20P78556 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC4.64□□□□□ -1.67
CCL20P78556 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCL20P78556 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCL20P78556 RN7SKP121-201ENST00000410842 305 ntBASIC4.64□□□□□ -1.67
CCL20P78556 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC4.64□□□□□ -1.67
CCL20P78556 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC4.64□□□□□ -1.67
CCL20P78556 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCL20P78556 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC4.64□□□□□ -1.67
CCL20P78556 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC4.64□□□□□ -1.67
CCL20P78556 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC4.64□□□□□ -1.67
CCL20P78556 RN7SL643P-201ENST00000471845 291 ntBASIC4.64□□□□□ -1.67
CCL20P78556 RPL38P3-201ENST00000484463 213 ntBASIC4.64□□□□□ -1.67
CCL20P78556 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC4.64□□□□□ -1.67
CCL20P78556 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.64□□□□□ -1.67
CCL20P78556 AC093878.1-201ENST00000515630 432 ntBASIC4.64□□□□□ -1.67
CCL20P78556 CARSP2-201ENST00000520688 277 ntBASIC4.64□□□□□ -1.67
CCL20P78556 AL121594.2-201ENST00000541658 472 ntBASIC4.64□□□□□ -1.67
CCL20P78556 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.64□□□□□ -1.67
CCL20P78556 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC4.64□□□□□ -1.67
CCL20P78556 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCL20P78556 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC4.64□□□□□ -1.67
CCL20P78556 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC4.64□□□□□ -1.67
CCL20P78556 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC4.64□□□□□ -1.67
CCL20P78556 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.64□□□□□ -1.67
CCL20P78556 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC4.64□□□□□ -1.67
CCL20P78556 BX005040.2-201ENST00000620504 370 ntBASIC4.64□□□□□ -1.67
CCL20P78556 AL138693.1-201ENST00000622219 129 ntBASIC4.64□□□□□ -1.67
CCL20P78556 FRG1EP-201ENST00000634469 770 ntBASIC4.64□□□□□ -1.67
CCL20P78556 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CCL20P78556 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.64□□□□□ -1.67
CCL20P78556 AC125336.1-201ENST00000508893 2827 ntBASIC4.64□□□□□ -1.67
CCL20P78556 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.64□□□□□ -1.67
CCL20P78556 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCL20P78556 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCL20P78556 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCL20P78556 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCL20P78556 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCL20P78556 AC010132.4-201ENST00000569883 1368 ntBASIC4.64□□□□□ -1.67
CCL20P78556 MFSD8-239ENST00000641590 2479 ntBASIC4.64□□□□□ -1.67
CCL20P78556 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCL20P78556 SMG1P5-202ENST00000529428 4219 ntBASIC4.64□□□□□ -1.67
CCL20P78556 SMG1P2-201ENST00000566127 4221 ntBASIC4.64□□□□□ -1.67
CCL20P78556 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCL20P78556 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCL20P78556 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCL20P78556 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCL20P78556 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.63□□□□□ -1.67
CCL20P78556 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCL20P78556 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCL20P78556 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC4.63□□□□□ -1.67
CCL20P78556 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCL20P78556 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCL20P78556 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC4.63□□□□□ -1.67
CCL20P78556 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCL20P78556 RGS5-202ENST00000367903 934 ntTSL 3 BASIC4.63□□□□□ -1.67
CCL20P78556 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CCL20P78556 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCL20P78556 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCL20P78556 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC4.63□□□□□ -1.67
CCL20P78556 AC109638.1-201ENST00000417406 326 ntBASIC4.63□□□□□ -1.67
CCL20P78556 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC4.63□□□□□ -1.67
CCL20P78556 AL359633.1-201ENST00000421403 310 ntBASIC4.63□□□□□ -1.67
CCL20P78556 AC108479.1-201ENST00000431142 427 ntBASIC4.63□□□□□ -1.67
CCL20P78556 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.63□□□□□ -1.67
CCL20P78556 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.63□□□□□ -1.67
CCL20P78556 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC4.63□□□□□ -1.67
CCL20P78556 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC4.63□□□□□ -1.67
CCL20P78556 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC4.63□□□□□ -1.67
CCL20P78556 NPM1P19-201ENST00000450070 712 ntBASIC4.63□□□□□ -1.67
CCL20P78556 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC4.63□□□□□ -1.67
CCL20P78556 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC4.63□□□□□ -1.67
CCL20P78556 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC4.63□□□□□ -1.67
CCL20P78556 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC4.63□□□□□ -1.67
CCL20P78556 RN7SL369P-201ENST00000477138 299 ntBASIC4.63□□□□□ -1.67
CCL20P78556 RN7SL326P-201ENST00000477493 296 ntBASIC4.63□□□□□ -1.67
CCL20P78556 AC018645.1-201ENST00000505003 109 ntBASIC4.63□□□□□ -1.67
CCL20P78556 MIR2117-201ENST00000516780 80 ntBASIC4.63□□□□□ -1.67
CCL20P78556 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.63□□□□□ -1.67
CCL20P78556 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC4.63□□□□□ -1.67
CCL20P78556 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CCL20P78556 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CCL20P78556 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC4.63□□□□□ -1.67
CCL20P78556 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC4.63□□□□□ -1.67
CCL20P78556 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCL20P78556 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCL20P78556 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCL20P78556 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC4.63□□□□□ -1.67
CCL20P78556 AC124944.3-204ENST00000641191 150 ntBASIC4.63□□□□□ -1.67
CCL20P78556 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.63□□□□□ -1.67
CCL20P78556 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.63□□□□□ -1.67
CCL20P78556 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCL20P78556 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCL20P78556 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
CCL20P78556 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCL20P78556 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.63□□□□□ -1.67
CCL20P78556 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms