Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CX3CL1P78423 CYCSP52-201ENST00000422857 310 ntBASIC5.17□□□□□ -1.58
CX3CL1P78423 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CX3CL1P78423 RNF19BPX-201ENST00000426224 625 ntBASIC5.17□□□□□ -1.58
CX3CL1P78423 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CX3CL1P78423 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.17□□□□□ -1.58
CX3CL1P78423 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.17□□□□□ -1.58
CX3CL1P78423 NPM1P23-201ENST00000440193 849 ntBASIC5.17□□□□□ -1.58
CX3CL1P78423 COL11A2P1-205ENST00000441798 676 ntBASIC5.17□□□□□ -1.58
CX3CL1P78423 MTND2P25-201ENST00000449028 610 ntBASIC5.17□□□□□ -1.58
CX3CL1P78423 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.17□□□□□ -1.58
CX3CL1P78423 AL034369.1-201ENST00000453808 477 ntBASIC5.17□□□□□ -1.58
CX3CL1P78423 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.17□□□□□ -1.58
CX3CL1P78423 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.17□□□□□ -1.58
CX3CL1P78423 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.17□□□□□ -1.58
CX3CL1P78423 AC092824.1-201ENST00000483524 576 ntBASIC5.17□□□□□ -1.58
CX3CL1P78423 PPP1R11P1-201ENST00000486095 376 ntBASIC5.17□□□□□ -1.58
CX3CL1P78423 AC022206.1-201ENST00000495947 347 ntBASIC5.17□□□□□ -1.58
CX3CL1P78423 AC091965.3-201ENST00000506236 208 ntBASIC5.17□□□□□ -1.58
CX3CL1P78423 GOLGA5P1-201ENST00000507317 980 ntBASIC5.17□□□□□ -1.58
CX3CL1P78423 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.17□□□□□ -1.58
CX3CL1P78423 AC139713.1-202ENST00000512366 460 ntBASIC5.17□□□□□ -1.58
CX3CL1P78423 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.17□□□□□ -1.58
CX3CL1P78423 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.17□□□□□ -1.58
CX3CL1P78423 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.17□□□□□ -1.58
CX3CL1P78423 HMGN1P26-201ENST00000558737 303 ntBASIC5.17□□□□□ -1.58
CX3CL1P78423 AC024267.2-201ENST00000582737 417 ntBASIC5.17□□□□□ -1.58
CX3CL1P78423 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.17□□□□□ -1.58
CX3CL1P78423 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.17□□□□□ -1.58
CX3CL1P78423 OR4H6P-202ENST00000603819 340 ntBASIC5.17□□□□□ -1.58
CX3CL1P78423 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.17□□□□□ -1.58
CX3CL1P78423 AC116165.3-201ENST00000614524 400 ntBASIC5.17□□□□□ -1.58
CX3CL1P78423 MRPL57P1-201ENST00000621486 265 ntBASIC5.17□□□□□ -1.58
CX3CL1P78423 MIR6503-201ENST00000622884 86 ntBASIC5.17□□□□□ -1.58
CX3CL1P78423 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.17□□□□□ -1.58
CX3CL1P78423 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CX3CL1P78423 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CX3CL1P78423 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
CX3CL1P78423 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
CX3CL1P78423 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
CX3CL1P78423 AC027279.4-201ENST00000624371 2072 ntBASIC5.17□□□□□ -1.58
CX3CL1P78423 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CX3CL1P78423 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.17□□□□□ -1.58
CX3CL1P78423 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.17□□□□□ -1.58
CX3CL1P78423 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CX3CL1P78423 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
CX3CL1P78423 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CX3CL1P78423 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CX3CL1P78423 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CX3CL1P78423 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
CX3CL1P78423 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CX3CL1P78423 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.17□□□□□ -1.58
CX3CL1P78423 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CX3CL1P78423 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CL1P78423 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.16□□□□□ -1.58
CX3CL1P78423 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.16□□□□□ -1.58
CX3CL1P78423 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CL1P78423 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CL1P78423 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CL1P78423 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CL1P78423 AC107977.1-201ENST00000355745 939 ntBASIC5.16□□□□□ -1.58
CX3CL1P78423 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CL1P78423 SNORD94-201ENST00000386037 137 ntBASIC5.16□□□□□ -1.58
CX3CL1P78423 AC245036.1-201ENST00000391727 309 ntBASIC5.16□□□□□ -1.58
CX3CL1P78423 AC116036.1-201ENST00000412199 367 ntBASIC5.16□□□□□ -1.58
CX3CL1P78423 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.16□□□□□ -1.58
CX3CL1P78423 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.16□□□□□ -1.58
CX3CL1P78423 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CL1P78423 RPL23AP85-201ENST00000421838 433 ntBASIC5.16□□□□□ -1.58
CX3CL1P78423 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.16□□□□□ -1.58
CX3CL1P78423 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.16□□□□□ -1.58
CX3CL1P78423 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.16□□□□□ -1.58
CX3CL1P78423 RPL17P35-201ENST00000432217 549 ntBASIC5.16□□□□□ -1.58
CX3CL1P78423 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.16□□□□□ -1.58
CX3CL1P78423 CYCSP53-201ENST00000455540 265 ntBASIC5.16□□□□□ -1.58
CX3CL1P78423 RPSAP24-201ENST00000461543 873 ntBASIC5.16□□□□□ -1.58
CX3CL1P78423 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.16□□□□□ -1.58
CX3CL1P78423 AC093870.1-201ENST00000506837 213 ntBASIC5.16□□□□□ -1.58
CX3CL1P78423 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CL1P78423 AC108157.1-201ENST00000510511 539 ntBASIC5.16□□□□□ -1.58
CX3CL1P78423 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.16□□□□□ -1.58
CX3CL1P78423 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CL1P78423 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.16□□□□□ -1.58
CX3CL1P78423 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.16□□□□□ -1.58
CX3CL1P78423 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.16□□□□□ -1.58
CX3CL1P78423 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CL1P78423 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.16□□□□□ -1.58
CX3CL1P78423 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.16□□□□□ -1.58
CX3CL1P78423 MTND2P13-201ENST00000577438 1039 ntBASIC5.16□□□□□ -1.58
CX3CL1P78423 AC019257.2-201ENST00000605539 497 ntBASIC5.16□□□□□ -1.58
CX3CL1P78423 AL390877.1-201ENST00000605704 214 ntBASIC5.16□□□□□ -1.58
CX3CL1P78423 AC005014.3-201ENST00000605985 190 ntBASIC5.16□□□□□ -1.58
CX3CL1P78423 AC067838.1-201ENST00000606064 577 ntBASIC5.16□□□□□ -1.58
CX3CL1P78423 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.16□□□□□ -1.58
CX3CL1P78423 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.16□□□□□ -1.58
CX3CL1P78423 AC015922.4-201ENST00000612568 690 ntBASIC5.16□□□□□ -1.58
CX3CL1P78423 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.16□□□□□ -1.58
CX3CL1P78423 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.16□□□□□ -1.58
CX3CL1P78423 AL132640.3-201ENST00000630473 177 ntBASIC5.16□□□□□ -1.58
CX3CL1P78423 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms