Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 USP9YP1-201ENST00000513521 1002 ntBASIC4.35□□□□□ -1.71
CKS1BP61024 AP005902.2-201ENST00000518393 307 ntBASIC4.35□□□□□ -1.71
CKS1BP61024 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC4.35□□□□□ -1.71
CKS1BP61024 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.35□□□□□ -1.71
CKS1BP61024 AC073916.1-201ENST00000545095 130 ntBASIC4.35□□□□□ -1.71
CKS1BP61024 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC4.35□□□□□ -1.71
CKS1BP61024 PPIAP6-201ENST00000557078 499 ntBASIC4.35□□□□□ -1.71
CKS1BP61024 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC4.35□□□□□ -1.71
CKS1BP61024 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC4.35□□□□□ -1.71
CKS1BP61024 AL132640.1-201ENST00000559594 619 ntBASIC4.35□□□□□ -1.71
CKS1BP61024 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC4.35□□□□□ -1.71
CKS1BP61024 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC4.35□□□□□ -1.71
CKS1BP61024 MIR4262-201ENST00000578394 54 ntBASIC4.35□□□□□ -1.71
CKS1BP61024 AC124856.1-201ENST00000600819 896 ntBASIC4.35□□□□□ -1.71
CKS1BP61024 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC4.35□□□□□ -1.71
CKS1BP61024 AL157899.1-201ENST00000604110 936 ntBASIC4.35□□□□□ -1.71
CKS1BP61024 AC104117.5-201ENST00000606195 547 ntBASIC4.35□□□□□ -1.71
CKS1BP61024 AL161931.1-201ENST00000612768 246 ntBASIC4.35□□□□□ -1.71
CKS1BP61024 MRPL57P3-201ENST00000619218 176 ntBASIC4.35□□□□□ -1.71
CKS1BP61024 AC106782.7-201ENST00000624024 418 ntBASIC4.35□□□□□ -1.71
CKS1BP61024 AC133555.5-201ENST00000624430 418 ntBASIC4.35□□□□□ -1.71
CKS1BP61024 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC4.35□□□□□ -1.71
CKS1BP61024 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CKS1BP61024 AL022322.2-201ENST00000624072 20397 ntBASIC4.35□□□□□ -1.71
CKS1BP61024 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.35□□□□□ -1.71
CKS1BP61024 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CKS1BP61024 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.35□□□□□ -1.71
CKS1BP61024 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.35□□□□□ -1.71
CKS1BP61024 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CKS1BP61024 CREM-217ENST00000439705 2306 ntTSL 5 BASIC4.35□□□□□ -1.71
CKS1BP61024 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CKS1BP61024 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CKS1BP61024 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CKS1BP61024 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CKS1BP61024 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.35□□□□□ -1.71
CKS1BP61024 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CKS1BP61024 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CKS1BP61024 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CKS1BP61024 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC4.34□□□□□ -1.71
CKS1BP61024 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CKS1BP61024 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CKS1BP61024 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.34□□□□□ -1.71
CKS1BP61024 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CKS1BP61024 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CKS1BP61024 RNA5SP301-201ENST00000362537 121 ntBASIC4.34□□□□□ -1.71
CKS1BP61024 RN7SKP28-201ENST00000364770 305 ntBASIC4.34□□□□□ -1.71
CKS1BP61024 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC4.34□□□□□ -1.71
CKS1BP61024 RNA5SP176-201ENST00000390956 110 ntBASIC4.34□□□□□ -1.71
CKS1BP61024 UBBP1-201ENST00000392399 473 ntBASIC4.34□□□□□ -1.71
CKS1BP61024 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CKS1BP61024 PDCL3P5-201ENST00000398028 722 ntBASIC4.34□□□□□ -1.71
CKS1BP61024 AL359694.1-201ENST00000403247 604 ntBASIC4.34□□□□□ -1.71
CKS1BP61024 RPLP1P10-201ENST00000413972 339 ntBASIC4.34□□□□□ -1.71
CKS1BP61024 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC4.34□□□□□ -1.71
CKS1BP61024 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.34□□□□□ -1.71
CKS1BP61024 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CKS1BP61024 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC4.34□□□□□ -1.71
CKS1BP61024 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.34□□□□□ -1.71
CKS1BP61024 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC4.34□□□□□ -1.71
CKS1BP61024 MTND2P40-201ENST00000436718 841 ntBASIC4.34□□□□□ -1.71
CKS1BP61024 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CKS1BP61024 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CKS1BP61024 RPS6P2-201ENST00000454208 705 ntBASIC4.34□□□□□ -1.71
CKS1BP61024 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC4.34□□□□□ -1.71
CKS1BP61024 NDUFB4P1-201ENST00000462398 381 ntBASIC4.34□□□□□ -1.71
CKS1BP61024 RN7SL849P-201ENST00000485236 295 ntBASIC4.34□□□□□ -1.71
CKS1BP61024 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.34□□□□□ -1.71
CKS1BP61024 RN7SL346P-201ENST00000491561 294 ntBASIC4.34□□□□□ -1.71
CKS1BP61024 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC4.34□□□□□ -1.71
CKS1BP61024 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC4.34□□□□□ -1.71
CKS1BP61024 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC4.34□□□□□ -1.71
CKS1BP61024 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC4.34□□□□□ -1.71
CKS1BP61024 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC4.34□□□□□ -1.71
CKS1BP61024 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC4.34□□□□□ -1.71
CKS1BP61024 OR4C1P-201ENST00000530880 937 ntBASIC4.34□□□□□ -1.71
CKS1BP61024 AC008126.1-201ENST00000549019 480 ntBASIC4.34□□□□□ -1.71
CKS1BP61024 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC4.34□□□□□ -1.71
CKS1BP61024 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC4.34□□□□□ -1.71
CKS1BP61024 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CKS1BP61024 RN7SL208P-201ENST00000577964 296 ntBASIC4.34□□□□□ -1.71
CKS1BP61024 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC4.34□□□□□ -1.71
CKS1BP61024 AC008507.3-201ENST00000585753 472 ntBASIC4.34□□□□□ -1.71
CKS1BP61024 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC4.34□□□□□ -1.71
CKS1BP61024 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC4.34□□□□□ -1.71
CKS1BP61024 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC4.34□□□□□ -1.71
CKS1BP61024 AL592504.1-201ENST00000605319 439 ntBASIC4.34□□□□□ -1.71
CKS1BP61024 AC092944.2-201ENST00000605443 889 ntBASIC4.34□□□□□ -1.71
CKS1BP61024 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC4.34□□□□□ -1.71
CKS1BP61024 BX005040.2-201ENST00000620504 370 ntBASIC4.34□□□□□ -1.71
CKS1BP61024 AC005753.1-201ENST00000623837 618 ntBASIC4.34□□□□□ -1.71
CKS1BP61024 RACK1-235ENST00000626067 564 ntTSL 2 BASIC4.34□□□□□ -1.71
CKS1BP61024 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC4.34□□□□□ -1.71
CKS1BP61024 HBG1-202ENST00000632727 369 ntTSL 3 BASIC4.34□□□□□ -1.71
CKS1BP61024 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC4.34□□□□□ -1.71
CKS1BP61024 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.34□□□□□ -1.71
CKS1BP61024 TRIM51GP-201ENST00000534741 1350 ntBASIC4.34□□□□□ -1.71
CKS1BP61024 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC4.34□□□□□ -1.71
CKS1BP61024 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CKS1BP61024 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.34□□□□□ -1.71
CKS1BP61024 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms