Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH11P55287 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH11P55287 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH11P55287 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
CDH11P55287 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH11P55287 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
CDH11P55287 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CDH11P55287 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH11P55287 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH11P55287 RN7SKP171-201ENST00000364417 303 ntBASIC5.73□□□□□ -1.49
CDH11P55287 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CDH11P55287 RNU11-6P-201ENST00000391127 133 ntBASIC5.73□□□□□ -1.49
CDH11P55287 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH11P55287 PRELID1P1-201ENST00000403549 660 ntBASIC5.73□□□□□ -1.49
CDH11P55287 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH11P55287 BX679664.2-201ENST00000439282 283 ntBASIC5.73□□□□□ -1.49
CDH11P55287 PCNPP2-201ENST00000441651 455 ntBASIC5.73□□□□□ -1.49
CDH11P55287 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.73□□□□□ -1.49
CDH11P55287 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.73□□□□□ -1.49
CDH11P55287 AC005017.1-201ENST00000482002 490 ntBASIC5.73□□□□□ -1.49
CDH11P55287 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.73□□□□□ -1.49
CDH11P55287 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.73□□□□□ -1.49
CDH11P55287 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.73□□□□□ -1.49
CDH11P55287 AC093664.1-201ENST00000511779 289 ntBASIC5.73□□□□□ -1.49
CDH11P55287 RNA5SP400-201ENST00000517155 111 ntBASIC5.73□□□□□ -1.49
CDH11P55287 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH11P55287 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.73□□□□□ -1.49
CDH11P55287 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.73□□□□□ -1.49
CDH11P55287 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.73□□□□□ -1.49
CDH11P55287 COX6B1P4-201ENST00000519826 484 ntBASIC5.73□□□□□ -1.49
CDH11P55287 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.73□□□□□ -1.49
CDH11P55287 AC110056.1-201ENST00000525759 911 ntBASIC5.73□□□□□ -1.49
CDH11P55287 AC107958.1-201ENST00000556576 290 ntBASIC5.73□□□□□ -1.49
CDH11P55287 AC092718.4-201ENST00000566639 716 ntBASIC5.73□□□□□ -1.49
CDH11P55287 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.73□□□□□ -1.49
CDH11P55287 MIR3154-201ENST00000577829 84 ntBASIC5.73□□□□□ -1.49
CDH11P55287 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH11P55287 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.73□□□□□ -1.49
CDH11P55287 AC245052.7-201ENST00000601161 359 ntBASIC5.73□□□□□ -1.49
CDH11P55287 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.73□□□□□ -1.49
CDH11P55287 WBP1LP12-201ENST00000604449 331 ntBASIC5.73□□□□□ -1.49
CDH11P55287 AC011891.2-201ENST00000604949 397 ntBASIC5.73□□□□□ -1.49
CDH11P55287 AC138473.1-201ENST00000605717 526 ntBASIC5.73□□□□□ -1.49
CDH11P55287 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.73□□□□□ -1.49
CDH11P55287 AL008723.3-201ENST00000608926 449 ntBASIC5.73□□□□□ -1.49
CDH11P55287 AL589743.6-201ENST00000611025 117 ntBASIC5.73□□□□□ -1.49
CDH11P55287 AC069542.2-201ENST00000624816 216 ntBASIC5.73□□□□□ -1.49
CDH11P55287 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.73□□□□□ -1.49
CDH11P55287 AC116667.2-201ENST00000641075 823 ntBASIC5.73□□□□□ -1.49
CDH11P55287 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH11P55287 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH11P55287 AP000432.2-201ENST00000624164 2048 ntBASIC5.73□□□□□ -1.49
CDH11P55287 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH11P55287 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH11P55287 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CDH11P55287 ZNF101P1-201ENST00000435701 1720 ntBASIC5.73□□□□□ -1.49
CDH11P55287 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH11P55287 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.73□□□□□ -1.49
CDH11P55287 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH11P55287 AL591135.1-201ENST00000401578 5914 ntBASIC5.73□□□□□ -1.49
CDH11P55287 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH11P55287 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH11P55287 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH11P55287 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CDH11P55287 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH11P55287 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.72□□□□□ -1.49
CDH11P55287 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH11P55287 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CDH11P55287 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CDH11P55287 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH11P55287 RNA5SP485-201ENST00000365053 119 ntBASIC5.72□□□□□ -1.49
CDH11P55287 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CDH11P55287 RAB5CP1-201ENST00000395972 580 ntBASIC5.72□□□□□ -1.49
CDH11P55287 AL391419.1-201ENST00000398901 1275 ntBASIC5.72□□□□□ -1.49
CDH11P55287 AL121835.1-201ENST00000404250 354 ntBASIC5.72□□□□□ -1.49
CDH11P55287 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH11P55287 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH11P55287 OR5W1P-201ENST00000423705 938 ntBASIC5.72□□□□□ -1.49
CDH11P55287 HMGB1P32-201ENST00000425971 565 ntBASIC5.72□□□□□ -1.49
CDH11P55287 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.72□□□□□ -1.49
CDH11P55287 AC007383.1-201ENST00000445875 636 ntBASIC5.72□□□□□ -1.49
CDH11P55287 EEF1B2P3-201ENST00000447718 678 ntBASIC5.72□□□□□ -1.49
CDH11P55287 AC097359.1-201ENST00000447946 463 ntBASIC5.72□□□□□ -1.49
CDH11P55287 CCNJP1-201ENST00000450600 1149 ntBASIC5.72□□□□□ -1.49
CDH11P55287 RPS27AP3-201ENST00000453803 454 ntBASIC5.72□□□□□ -1.49
CDH11P55287 AC007386.1-201ENST00000455212 582 ntBASIC5.72□□□□□ -1.49
CDH11P55287 AL445687.2-201ENST00000458156 728 ntBASIC5.72□□□□□ -1.49
CDH11P55287 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH11P55287 AL133372.1-201ENST00000493565 745 ntBASIC5.72□□□□□ -1.49
CDH11P55287 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH11P55287 CCNHP1-201ENST00000513311 678 ntBASIC5.72□□□□□ -1.49
CDH11P55287 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.72□□□□□ -1.49
CDH11P55287 AC093816.1-201ENST00000515076 913 ntBASIC5.72□□□□□ -1.49
CDH11P55287 SNORD116-30-201ENST00000516468 85 ntBASIC5.72□□□□□ -1.49
CDH11P55287 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH11P55287 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH11P55287 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CDH11P55287 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.72□□□□□ -1.49
CDH11P55287 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH11P55287 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms