Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RN7SKP108-201ENST00000411367 328 ntBASIC6.32□□□□□ -1.4
CDH6P55285 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDH6P55285 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.32□□□□□ -1.4
CDH6P55285 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.32□□□□□ -1.4
CDH6P55285 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.32□□□□□ -1.4
CDH6P55285 AC108103.1-201ENST00000511286 446 ntBASIC6.32□□□□□ -1.4
CDH6P55285 HMGN1P17-201ENST00000513734 295 ntBASIC6.32□□□□□ -1.4
CDH6P55285 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.32□□□□□ -1.4
CDH6P55285 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH6P55285 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.32□□□□□ -1.4
CDH6P55285 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.32□□□□□ -1.4
CDH6P55285 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.32□□□□□ -1.4
CDH6P55285 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.32□□□□□ -1.4
CDH6P55285 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.32□□□□□ -1.4
CDH6P55285 AC097641.3-201ENST00000613523 464 ntBASIC6.32□□□□□ -1.4
CDH6P55285 U1.25-201ENST00000614085 162 ntBASIC6.32□□□□□ -1.4
CDH6P55285 RFPL4AP6-201ENST00000616792 846 ntBASIC6.32□□□□□ -1.4
CDH6P55285 U1.34-201ENST00000618578 162 ntBASIC6.32□□□□□ -1.4
CDH6P55285 U1.31-201ENST00000620022 160 ntBASIC6.32□□□□□ -1.4
CDH6P55285 AC009120.7-201ENST00000623452 780 ntBASIC6.32□□□□□ -1.4
CDH6P55285 AC016583.1-201ENST00000624221 2431 ntBASIC6.32□□□□□ -1.4
CDH6P55285 ZNF101P1-201ENST00000435701 1720 ntBASIC6.32□□□□□ -1.4
CDH6P55285 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH6P55285 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CDH6P55285 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDH6P55285 MTND5P12-201ENST00000502851 1449 ntBASIC6.32□□□□□ -1.4
CDH6P55285 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH6P55285 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDH6P55285 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CDH6P55285 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH6P55285 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH6P55285 AL591135.1-201ENST00000401578 5914 ntBASIC6.31□□□□□ -1.4
CDH6P55285 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.31□□□□□ -1.4
CDH6P55285 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.31□□□□□ -1.4
CDH6P55285 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CDH6P55285 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CDH6P55285 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.31□□□□□ -1.4
CDH6P55285 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.31□□□□□ -1.4
CDH6P55285 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.31□□□□□ -1.4
CDH6P55285 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.31□□□□□ -1.4
CDH6P55285 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CDH6P55285 AC119674.1-202ENST00000641333 1860 ntBASIC6.31□□□□□ -1.4
CDH6P55285 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH6P55285 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.31□□□□□ -1.4
CDH6P55285 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.31□□□□□ -1.4
CDH6P55285 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CDH6P55285 SNORA70.9-201ENST00000384370 135 ntBASIC6.31□□□□□ -1.4
CDH6P55285 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH6P55285 AL096829.1-201ENST00000413677 457 ntBASIC6.31□□□□□ -1.4
CDH6P55285 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.31□□□□□ -1.4
CDH6P55285 NME1P1-201ENST00000420914 382 ntBASIC6.31□□□□□ -1.4
CDH6P55285 RPS15AP30-201ENST00000420976 390 ntBASIC6.31□□□□□ -1.4
CDH6P55285 AL139158.1-201ENST00000424719 340 ntBASIC6.31□□□□□ -1.4
CDH6P55285 H3F3BP1-201ENST00000440551 403 ntBASIC6.31□□□□□ -1.4
CDH6P55285 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.31□□□□□ -1.4
CDH6P55285 AP002453.1-201ENST00000492327 668 ntBASIC6.31□□□□□ -1.4
CDH6P55285 AC106822.1-201ENST00000502647 526 ntBASIC6.31□□□□□ -1.4
CDH6P55285 RNA5SP441-201ENST00000516809 88 ntBASIC6.31□□□□□ -1.4
CDH6P55285 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.31□□□□□ -1.4
CDH6P55285 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.31□□□□□ -1.4
CDH6P55285 AC004232.2-201ENST00000574245 821 ntBASIC6.31□□□□□ -1.4
CDH6P55285 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.31□□□□□ -1.4
CDH6P55285 SMIM12P1-201ENST00000603004 274 ntBASIC6.31□□□□□ -1.4
CDH6P55285 AC005828.7-201ENST00000607331 556 ntBASIC6.31□□□□□ -1.4
CDH6P55285 AL080312.2-201ENST00000613001 630 ntBASIC6.31□□□□□ -1.4
CDH6P55285 AC069234.4-201ENST00000621276 412 ntBASIC6.31□□□□□ -1.4
CDH6P55285 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH6P55285 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDH6P55285 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH6P55285 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.31□□□□□ -1.4
CDH6P55285 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH6P55285 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.31□□□□□ -1.4
CDH6P55285 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH6P55285 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.31□□□□□ -1.4
CDH6P55285 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CDH6P55285 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CDH6P55285 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.31□□□□□ -1.4
CDH6P55285 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.3□□□□□ -1.4
CDH6P55285 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.3□□□□□ -1.4
CDH6P55285 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
CDH6P55285 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDH6P55285 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH6P55285 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH6P55285 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDH6P55285 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.3□□□□□ -1.4
CDH6P55285 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CDH6P55285 FUNDC2P3-201ENST00000334716 533 ntBASIC6.3□□□□□ -1.4
CDH6P55285 RNA5SP110-201ENST00000362638 115 ntBASIC6.3□□□□□ -1.4
CDH6P55285 RNU105B-201ENST00000364478 208 ntBASIC6.3□□□□□ -1.4
CDH6P55285 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.3□□□□□ -1.4
CDH6P55285 AL096800.1-201ENST00000405326 893 ntBASIC6.3□□□□□ -1.4
CDH6P55285 SNORA77.2-201ENST00000408571 112 ntBASIC6.3□□□□□ -1.4
CDH6P55285 RN7SKP86-201ENST00000410454 332 ntBASIC6.3□□□□□ -1.4
CDH6P55285 RPL35AP31-201ENST00000418340 337 ntBASIC6.3□□□□□ -1.4
CDH6P55285 AC092865.3-201ENST00000425390 1026 ntBASIC6.3□□□□□ -1.4
CDH6P55285 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.3□□□□□ -1.4
CDH6P55285 ZNF619P1-201ENST00000446539 752 ntBASIC6.3□□□□□ -1.4
CDH6P55285 AL162739.1-201ENST00000450606 307 ntBASIC6.3□□□□□ -1.4
CDH6P55285 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.3□□□□□ -1.4
CDH6P55285 RPL23AP40-201ENST00000487630 390 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms