Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NKX2-1P43699 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.58
NKX2-1P43699 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NKX2-1P43699 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
NKX2-1P43699 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-1P43699 OR6K3-202ENST00000368146 996 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC5.15□□□□□ -1.59
NKX2-1P43699 PDCL3P5-201ENST00000398028 722 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
NKX2-1P43699 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-1P43699 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC5.15□□□□□ -1.59
NKX2-1P43699 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.15□□□□□ -1.59
NKX2-1P43699 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-1P43699 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.15□□□□□ -1.59
NKX2-1P43699 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-1P43699 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
NKX2-1P43699 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-1P43699 SETP10-201ENST00000424368 814 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 AC106901.1-201ENST00000425086 698 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
NKX2-1P43699 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-1P43699 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.15□□□□□ -1.59
NKX2-1P43699 CENPN-204ENST00000428963 971 ntTSL 2 BASIC5.15□□□□□ -1.59
NKX2-1P43699 MRPS33P4-201ENST00000434892 317 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.15□□□□□ -1.59
NKX2-1P43699 AC009963.4-201ENST00000448535 339 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.15□□□□□ -1.59
NKX2-1P43699 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
NKX2-1P43699 RPS4XP19-201ENST00000460237 736 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 RPL7AP30-201ENST00000482859 796 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 RN7SL776P-201ENST00000493390 268 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 RPL5P14-201ENST00000494197 878 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.15□□□□□ -1.59
NKX2-1P43699 CYP4F27P-201ENST00000514557 494 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.15□□□□□ -1.59
NKX2-1P43699 SCARNA5-201ENST00000516201 276 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC5.15□□□□□ -1.59
NKX2-1P43699 COX6B1P4-201ENST00000519826 484 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.15□□□□□ -1.59
NKX2-1P43699 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.15□□□□□ -1.59
NKX2-1P43699 AP001994.1-201ENST00000527539 826 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.15□□□□□ -1.59
NKX2-1P43699 AC074029.2-201ENST00000551045 634 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.15□□□□□ -1.59
NKX2-1P43699 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.15□□□□□ -1.59
NKX2-1P43699 AC011193.2-201ENST00000582638 367 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC5.15□□□□□ -1.59
NKX2-1P43699 MIR4428-201ENST00000584884 73 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 WBP1LP11-201ENST00000586141 328 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC5.15□□□□□ -1.59
NKX2-1P43699 RPS27AP19-201ENST00000597285 458 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 AC091133.5-201ENST00000603088 301 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 AC027334.1-201ENST00000603257 310 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.15□□□□□ -1.59
NKX2-1P43699 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.15□□□□□ -1.59
NKX2-1P43699 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.15□□□□□ -1.59
NKX2-1P43699 AC015922.4-201ENST00000612568 690 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 WBP1LP8-201ENST00000617401 327 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 MRPL57P3-201ENST00000619218 176 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 AL162233.1-201ENST00000620014 944 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
NKX2-1P43699 AL035425.4-201ENST00000624509 1063 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC5.15□□□□□ -1.59
NKX2-1P43699 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.15□□□□□ -1.59
NKX2-1P43699 AC003992.1-201ENST00000635364 557 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
NKX2-1P43699 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-1P43699 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
NKX2-1P43699 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-1P43699 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.15□□□□□ -1.59
NKX2-1P43699 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
NKX2-1P43699 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.15□□□□□ -1.59
NKX2-1P43699 PSMC1P6-201ENST00000477233 1319 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 KYNUP3-201ENST00000574386 1341 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 SAMMSON-210ENST00000641260 1308 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-1P43699 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-1P43699 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.15□□□□□ -1.59
NKX2-1P43699 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-1P43699 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.15□□□□□ -1.59
NKX2-1P43699 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-1P43699 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-1P43699 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.15□□□□□ -1.59
NKX2-1P43699 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-1P43699 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
NKX2-1P43699 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.14□□□□□ -1.59
NKX2-1P43699 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-1P43699 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-1P43699 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-1P43699 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC5.14□□□□□ -1.59
NKX2-1P43699 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-1P43699 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-1P43699 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
NKX2-1P43699 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
NKX2-1P43699 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
NKX2-1P43699 RNU1-56P-201ENST00000391303 164 ntBASIC5.14□□□□□ -1.59
NKX2-1P43699 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.14□□□□□ -1.59
NKX2-1P43699 AL121977.1-201ENST00000401636 979 ntBASIC5.14□□□□□ -1.59
NKX2-1P43699 ST13P16-201ENST00000401760 781 ntBASIC5.14□□□□□ -1.59
NKX2-1P43699 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms