Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 MIR4420-201ENST00000583944 77 ntBASIC6.02□□□□□ -1.45
SHMT2P34897 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SHMT2P34897 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.02□□□□□ -1.45
SHMT2P34897 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.02□□□□□ -1.45
SHMT2P34897 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.02□□□□□ -1.45
SHMT2P34897 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.02□□□□□ -1.45
SHMT2P34897 AC005899.7-201ENST00000618199 588 ntBASIC6.02□□□□□ -1.45
SHMT2P34897 AC022726.2-201ENST00000634673 547 ntBASIC6.02□□□□□ -1.45
SHMT2P34897 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHMT2P34897 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.02□□□□□ -1.45
SHMT2P34897 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
SHMT2P34897 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHMT2P34897 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHMT2P34897 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.02□□□□□ -1.45
SHMT2P34897 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHMT2P34897 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHMT2P34897 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHMT2P34897 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.01□□□□□ -1.45
SHMT2P34897 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHMT2P34897 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SHMT2P34897 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHMT2P34897 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.01□□□□□ -1.45
SHMT2P34897 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.01□□□□□ -1.45
SHMT2P34897 SNORA43.1-201ENST00000364863 140 ntBASIC6.01□□□□□ -1.45
SHMT2P34897 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.01□□□□□ -1.45
SHMT2P34897 RNA5SP156-201ENST00000410250 110 ntBASIC6.01□□□□□ -1.45
SHMT2P34897 AC130360.1-201ENST00000425489 1117 ntBASIC6.01□□□□□ -1.45
SHMT2P34897 AC021876.1-201ENST00000425959 359 ntBASIC6.01□□□□□ -1.45
SHMT2P34897 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.01□□□□□ -1.45
SHMT2P34897 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.01□□□□□ -1.45
SHMT2P34897 KATNBL1P2-201ENST00000433311 835 ntBASIC6.01□□□□□ -1.45
SHMT2P34897 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.01□□□□□ -1.45
SHMT2P34897 GAPDHP23-201ENST00000444823 993 ntBASIC6.01□□□□□ -1.45
SHMT2P34897 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.01□□□□□ -1.45
SHMT2P34897 AC103563.5-201ENST00000455643 364 ntBASIC6.01□□□□□ -1.45
SHMT2P34897 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.01□□□□□ -1.45
SHMT2P34897 RN7SL170P-201ENST00000487098 295 ntBASIC6.01□□□□□ -1.45
SHMT2P34897 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHMT2P34897 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.01□□□□□ -1.45
SHMT2P34897 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.01□□□□□ -1.45
SHMT2P34897 RN7SKP70-201ENST00000516655 271 ntBASIC6.01□□□□□ -1.45
SHMT2P34897 SNORA81.2-201ENST00000516868 170 ntBASIC6.01□□□□□ -1.45
SHMT2P34897 IGKV2-19-201ENST00000518132 283 ntBASIC6.01□□□□□ -1.45
SHMT2P34897 AC011853.1-201ENST00000518911 454 ntBASIC6.01□□□□□ -1.45
SHMT2P34897 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.01□□□□□ -1.45
SHMT2P34897 AC130365.2-201ENST00000525882 1201 ntBASIC6.01□□□□□ -1.45
SHMT2P34897 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.01□□□□□ -1.45
SHMT2P34897 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.01□□□□□ -1.45
SHMT2P34897 AC092865.1-201ENST00000544395 1023 ntBASIC6.01□□□□□ -1.45
SHMT2P34897 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.01□□□□□ -1.45
SHMT2P34897 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.01□□□□□ -1.45
SHMT2P34897 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.01□□□□□ -1.45
SHMT2P34897 OR4H6P-201ENST00000563771 921 ntBASIC6.01□□□□□ -1.45
SHMT2P34897 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.01□□□□□ -1.45
SHMT2P34897 AC027229.1-201ENST00000583887 253 ntBASIC6.01□□□□□ -1.45
SHMT2P34897 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.01□□□□□ -1.45
SHMT2P34897 AC124916.2-201ENST00000604416 224 ntBASIC6.01□□□□□ -1.45
SHMT2P34897 AC092681.3-201ENST00000609463 678 ntBASIC6.01□□□□□ -1.45
SHMT2P34897 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.01□□□□□ -1.45
SHMT2P34897 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHMT2P34897 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.01□□□□□ -1.45
SHMT2P34897 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHMT2P34897 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHMT2P34897 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHMT2P34897 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHMT2P34897 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.01□□□□□ -1.45
SHMT2P34897 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SHMT2P34897 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
SHMT2P34897 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
SHMT2P34897 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6□□□□□ -1.45
SHMT2P34897 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SHMT2P34897 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6□□□□□ -1.45
SHMT2P34897 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
SHMT2P34897 AC015799.1-201ENST00000622996 3122 ntBASIC6□□□□□ -1.45
SHMT2P34897 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6□□□□□ -1.45
SHMT2P34897 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6□□□□□ -1.45
SHMT2P34897 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHMT2P34897 RNA5SP514-201ENST00000363717 111 ntBASIC6□□□□□ -1.45
SHMT2P34897 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SHMT2P34897 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SHMT2P34897 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6□□□□□ -1.45
SHMT2P34897 HMGA1P8-201ENST00000414130 321 ntBASIC6□□□□□ -1.45
SHMT2P34897 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6□□□□□ -1.45
SHMT2P34897 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6□□□□□ -1.45
SHMT2P34897 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6□□□□□ -1.45
SHMT2P34897 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6□□□□□ -1.45
SHMT2P34897 AL022237.1-201ENST00000446663 358 ntBASIC6□□□□□ -1.45
SHMT2P34897 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6□□□□□ -1.45
SHMT2P34897 AC002553.3-201ENST00000453002 341 ntBASIC6□□□□□ -1.45
SHMT2P34897 AC002075.1-201ENST00000457396 676 ntBASIC6□□□□□ -1.45
SHMT2P34897 AC009963.3-201ENST00000458090 486 ntBASIC6□□□□□ -1.45
SHMT2P34897 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6□□□□□ -1.45
SHMT2P34897 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6□□□□□ -1.45
SHMT2P34897 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6□□□□□ -1.45
SHMT2P34897 AC006512.2-201ENST00000543250 486 ntBASIC6□□□□□ -1.45
SHMT2P34897 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6□□□□□ -1.45
SHMT2P34897 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHMT2P34897 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6□□□□□ -1.45
SHMT2P34897 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SHMT2P34897 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms