Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC8.06□□□□□ -1.12
VARSP26640 MTND1P35-201ENST00000526739 508 ntBASIC8.06□□□□□ -1.12
VARSP26640 LINC01499-201ENST00000528720 553 ntTSL 4 BASIC8.06□□□□□ -1.12
VARSP26640 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
VARSP26640 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC8.06□□□□□ -1.12
VARSP26640 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC8.06□□□□□ -1.12
VARSP26640 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC8.06□□□□□ -1.12
VARSP26640 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.06□□□□□ -1.12
VARSP26640 COX6CP4-201ENST00000605798 228 ntBASIC8.06□□□□□ -1.12
VARSP26640 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC8.06□□□□□ -1.12
VARSP26640 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC8.06□□□□□ -1.12
VARSP26640 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC8.06□□□□□ -1.12
VARSP26640 AC005962.2-201ENST00000611427 652 ntBASIC8.06□□□□□ -1.12
VARSP26640 FAM30B-201ENST00000611556 397 ntBASIC8.06□□□□□ -1.12
VARSP26640 AC040896.1-201ENST00000613819 479 ntBASIC8.06□□□□□ -1.12
VARSP26640 AL122125.1-201ENST00000616999 600 ntBASIC8.06□□□□□ -1.12
VARSP26640 MIR6829-201ENST00000620375 67 ntBASIC8.06□□□□□ -1.12
VARSP26640 MRAS-211ENST00000621127 3801 ntTSL 5 BASIC8.06□□□□□ -1.12
VARSP26640 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC8.06□□□□□ -1.12
VARSP26640 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
VARSP26640 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
VARSP26640 AL669831.5-218ENST00000591702 1873 ntBASIC8.06□□□□□ -1.12
VARSP26640 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC8.06□□□□□ -1.12
VARSP26640 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
VARSP26640 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
VARSP26640 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
VARSP26640 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC8.06□□□□□ -1.12
VARSP26640 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
VARSP26640 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
VARSP26640 NCOA4P2-201ENST00000340589 1813 ntBASIC8.06□□□□□ -1.12
VARSP26640 RTP3-201ENST00000296142 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
VARSP26640 ATP5A1P1-201ENST00000454088 1321 ntBASIC8.05□□□□□ -1.12
VARSP26640 PIGK-201ENST00000359130 1926 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
VARSP26640 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC8.05□□□□□ -1.12
VARSP26640 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
VARSP26640 FLJ42393-201ENST00000623801 2270 ntBASIC8.05□□□□□ -1.12
VARSP26640 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
VARSP26640 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
VARSP26640 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC8.05□□□□□ -1.12
VARSP26640 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
VARSP26640 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
VARSP26640 EIF4BP2-201ENST00000416702 1794 ntBASIC8.05□□□□□ -1.12
VARSP26640 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC8.05□□□□□ -1.12
VARSP26640 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC8.05□□□□□ -1.12
VARSP26640 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC8.05□□□□□ -1.12
VARSP26640 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
VARSP26640 OR4K15-201ENST00000305051 1216 ntBASIC8.05□□□□□ -1.12
VARSP26640 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC8.05□□□□□ -1.12
VARSP26640 RNU1-8P-201ENST00000384328 165 ntBASIC8.05□□□□□ -1.12
VARSP26640 MIR654-201ENST00000385199 81 ntBASIC8.05□□□□□ -1.12
VARSP26640 SNORA40.3-201ENST00000390964 122 ntBASIC8.05□□□□□ -1.12
VARSP26640 MTCYBP36-201ENST00000404146 440 ntBASIC8.05□□□□□ -1.12
VARSP26640 RPL26P37-201ENST00000411983 438 ntBASIC8.05□□□□□ -1.12
VARSP26640 RPL17P12-201ENST00000413391 526 ntBASIC8.05□□□□□ -1.12
VARSP26640 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC8.05□□□□□ -1.12
VARSP26640 AC092647.1-201ENST00000420654 287 ntBASIC8.05□□□□□ -1.12
VARSP26640 BRWD1-AS1-201ENST00000423274 691 ntTSL 4 BASIC8.05□□□□□ -1.12
VARSP26640 MTCO1P20-201ENST00000425366 358 ntBASIC8.05□□□□□ -1.12
VARSP26640 AL357632.1-201ENST00000426688 643 ntBASIC8.05□□□□□ -1.12
VARSP26640 LINC01363-201ENST00000426709 971 ntTSL 5 BASIC8.05□□□□□ -1.12
VARSP26640 NANOGP4-201ENST00000427230 913 ntBASIC8.05□□□□□ -1.12
VARSP26640 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
VARSP26640 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC8.05□□□□□ -1.12
VARSP26640 RPS29P16-201ENST00000452798 171 ntBASIC8.05□□□□□ -1.12
VARSP26640 GAPDHP28-201ENST00000455134 1003 ntBASIC8.05□□□□□ -1.12
VARSP26640 RNU7-157P-201ENST00000459600 66 ntBASIC8.05□□□□□ -1.12
VARSP26640 RPS4XP12-201ENST00000461747 709 ntBASIC8.05□□□□□ -1.12
VARSP26640 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
VARSP26640 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC8.05□□□□□ -1.12
VARSP26640 GSTO3P-201ENST00000504733 718 ntBASIC8.05□□□□□ -1.12
VARSP26640 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC8.05□□□□□ -1.12
VARSP26640 RPL10P19-201ENST00000519013 301 ntBASIC8.05□□□□□ -1.12
VARSP26640 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC8.05□□□□□ -1.12
VARSP26640 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC8.05□□□□□ -1.12
VARSP26640 HPRT1P3-201ENST00000539521 576 ntBASIC8.05□□□□□ -1.12
VARSP26640 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC8.05□□□□□ -1.12
VARSP26640 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC8.05□□□□□ -1.12
VARSP26640 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
VARSP26640 PSMB7P1-201ENST00000556349 514 ntBASIC8.05□□□□□ -1.12
VARSP26640 APOOP5-202ENST00000564761 566 ntBASIC8.05□□□□□ -1.12
VARSP26640 ELMO2P1-202ENST00000614283 794 ntBASIC8.05□□□□□ -1.12
VARSP26640 RN7SL820P-201ENST00000616437 299 ntBASIC8.05□□□□□ -1.12
VARSP26640 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC8.05□□□□□ -1.12
VARSP26640 AC244517.10-201ENST00000624396 548 ntAPPRIS P1 TSL 4 BASIC8.05□□□□□ -1.12
VARSP26640 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
VARSP26640 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC8.05□□□□□ -1.12
VARSP26640 EEF1A1P10-201ENST00000475365 1390 ntBASIC8.05□□□□□ -1.12
VARSP26640 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
VARSP26640 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
VARSP26640 AL008638.2-201ENST00000453934 2383 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
VARSP26640 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
VARSP26640 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
VARSP26640 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC8.05□□□□□ -1.12
VARSP26640 PARN-201ENST00000341484 2100 ntTSL 2 BASIC8.05□□□□□ -1.12
VARSP26640 AL451064.2-201ENST00000623514 1654 ntBASIC8.05□□□□□ -1.12
VARSP26640 AC132825.1-201ENST00000463573 2247 ntBASIC8.05□□□□□ -1.12
VARSP26640 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
VARSP26640 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
VARSP26640 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
VARSP26640 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms