Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DPA1P20036 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DPA1P20036 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HLA-DPA1P20036 AL356968.2-201ENST00000412769 1257 ntBASIC6.27□□□□□ -1.41
HLA-DPA1P20036 AC007562.1-201ENST00000421819 517 ntBASIC6.27□□□□□ -1.41
HLA-DPA1P20036 AL139158.1-201ENST00000424719 340 ntBASIC6.27□□□□□ -1.41
HLA-DPA1P20036 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.27□□□□□ -1.41
HLA-DPA1P20036 AC010086.1-201ENST00000437359 1052 ntBASIC6.27□□□□□ -1.41
HLA-DPA1P20036 AL645936.1-201ENST00000441979 518 ntBASIC6.27□□□□□ -1.41
HLA-DPA1P20036 AC023274.2-201ENST00000445264 521 ntBASIC6.27□□□□□ -1.41
HLA-DPA1P20036 AC007383.1-201ENST00000445875 636 ntBASIC6.27□□□□□ -1.41
HLA-DPA1P20036 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.27□□□□□ -1.41
HLA-DPA1P20036 HIGD1AP16-201ENST00000450986 258 ntBASIC6.27□□□□□ -1.41
HLA-DPA1P20036 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.27□□□□□ -1.41
HLA-DPA1P20036 RN7SL649P-201ENST00000496974 275 ntBASIC6.27□□□□□ -1.41
HLA-DPA1P20036 SNX18P24-201ENST00000505249 671 ntBASIC6.27□□□□□ -1.41
HLA-DPA1P20036 HMGN1P16-201ENST00000508308 283 ntBASIC6.27□□□□□ -1.41
HLA-DPA1P20036 OR4A41P-201ENST00000533053 928 ntBASIC6.27□□□□□ -1.41
HLA-DPA1P20036 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.27□□□□□ -1.41
HLA-DPA1P20036 AC121758.1-202ENST00000556917 658 ntBASIC6.27□□□□□ -1.41
HLA-DPA1P20036 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.27□□□□□ -1.41
HLA-DPA1P20036 RN7SL230P-201ENST00000580835 303 ntBASIC6.27□□□□□ -1.41
HLA-DPA1P20036 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.27□□□□□ -1.41
HLA-DPA1P20036 AL591167.1-201ENST00000607321 456 ntBASIC6.27□□□□□ -1.41
HLA-DPA1P20036 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.27□□□□□ -1.41
HLA-DPA1P20036 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.27□□□□□ -1.41
HLA-DPA1P20036 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.27□□□□□ -1.41
HLA-DPA1P20036 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.27□□□□□ -1.41
HLA-DPA1P20036 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.27□□□□□ -1.41
HLA-DPA1P20036 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
HLA-DPA1P20036 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DPA1P20036 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DPA1P20036 CR382285.2-201ENST00000624662 1495 ntBASIC6.27□□□□□ -1.41
HLA-DPA1P20036 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DPA1P20036 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DPA1P20036 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 AC233968.1-201ENST00000611212 1300 ntBASIC6.26□□□□□ -1.41
HLA-DPA1P20036 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 AL133243.2-201ENST00000610331 1621 ntBASIC6.26□□□□□ -1.41
HLA-DPA1P20036 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 AL360271.1-201ENST00000395679 510 ntBASIC6.26□□□□□ -1.41
HLA-DPA1P20036 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 RN7SKP144-201ENST00000411108 279 ntBASIC6.26□□□□□ -1.41
HLA-DPA1P20036 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 VN1R20P-201ENST00000425215 966 ntBASIC6.26□□□□□ -1.41
HLA-DPA1P20036 IGLV3-4-201ENST00000432300 244 ntBASIC6.26□□□□□ -1.41
HLA-DPA1P20036 AL590399.4-201ENST00000436561 601 ntBASIC6.26□□□□□ -1.41
HLA-DPA1P20036 GAPDHP23-201ENST00000444823 993 ntBASIC6.26□□□□□ -1.41
HLA-DPA1P20036 AL161722.1-201ENST00000446972 1032 ntBASIC6.26□□□□□ -1.41
HLA-DPA1P20036 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 RARRES2P3-201ENST00000457739 473 ntBASIC6.26□□□□□ -1.41
HLA-DPA1P20036 RN7SL741P-201ENST00000482473 289 ntBASIC6.26□□□□□ -1.41
HLA-DPA1P20036 MTND6P8-201ENST00000503471 522 ntBASIC6.26□□□□□ -1.41
HLA-DPA1P20036 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 RPL12P48-201ENST00000605620 304 ntBASIC6.26□□□□□ -1.41
HLA-DPA1P20036 AC009779.8-202ENST00000607990 932 ntBASIC6.26□□□□□ -1.41
HLA-DPA1P20036 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.26□□□□□ -1.41
HLA-DPA1P20036 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DPA1P20036 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 AC099535.1-201ENST00000408928 371 ntBASIC6.25□□□□□ -1.41
HLA-DPA1P20036 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 AC099782.1-201ENST00000425889 474 ntBASIC6.25□□□□□ -1.41
HLA-DPA1P20036 TRGV7-201ENST00000427089 353 ntBASIC6.25□□□□□ -1.41
HLA-DPA1P20036 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 MRPS21P3-201ENST00000436696 262 ntBASIC6.25□□□□□ -1.41
HLA-DPA1P20036 OR3D1P-201ENST00000438288 955 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms