Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
KRT3P12035 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
KRT3P12035 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
KRT3P12035 AC006600.2-201ENST00000624834 2506 ntBASIC6.44□□□□□ -1.38
KRT3P12035 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
KRT3P12035 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
KRT3P12035 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
KRT3P12035 RNA5SP375-201ENST00000362975 119 ntBASIC6.44□□□□□ -1.38
KRT3P12035 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
KRT3P12035 AL121835.1-201ENST00000404250 354 ntBASIC6.44□□□□□ -1.38
KRT3P12035 AC015977.1-201ENST00000418887 292 ntBASIC6.44□□□□□ -1.38
KRT3P12035 THEM7P-201ENST00000419556 672 ntBASIC6.44□□□□□ -1.38
KRT3P12035 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.44□□□□□ -1.38
KRT3P12035 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.44□□□□□ -1.38
KRT3P12035 PSMD10P2-201ENST00000432890 672 ntBASIC6.44□□□□□ -1.38
KRT3P12035 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.44□□□□□ -1.38
KRT3P12035 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.44□□□□□ -1.38
KRT3P12035 RNA5SP434-201ENST00000516647 121 ntBASIC6.44□□□□□ -1.38
KRT3P12035 TPM3P3-201ENST00000521343 354 ntBASIC6.44□□□□□ -1.38
KRT3P12035 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.44□□□□□ -1.38
KRT3P12035 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC6.44□□□□□ -1.38
KRT3P12035 RN7SL230P-201ENST00000580835 303 ntBASIC6.44□□□□□ -1.38
KRT3P12035 AP005136.2-201ENST00000583253 1049 ntBASIC6.44□□□□□ -1.38
KRT3P12035 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.44□□□□□ -1.38
KRT3P12035 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.44□□□□□ -1.38
KRT3P12035 AC011500.1-201ENST00000601963 469 ntBASIC6.44□□□□□ -1.38
KRT3P12035 AC004890.3-201ENST00000605566 1095 ntBASIC6.44□□□□□ -1.38
KRT3P12035 AL135999.3-201ENST00000610501 812 ntBASIC6.44□□□□□ -1.38
KRT3P12035 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.44□□□□□ -1.38
KRT3P12035 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.44□□□□□ -1.38
KRT3P12035 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.44□□□□□ -1.38
KRT3P12035 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.44□□□□□ -1.38
KRT3P12035 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.44□□□□□ -1.38
KRT3P12035 AC090220.1-201ENST00000593078 1699 ntBASIC6.44□□□□□ -1.38
KRT3P12035 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
KRT3P12035 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.44□□□□□ -1.38
KRT3P12035 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
KRT3P12035 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRT3P12035 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
KRT3P12035 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
KRT3P12035 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRT3P12035 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
KRT3P12035 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRT3P12035 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRT3P12035 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.43□□□□□ -1.38
KRT3P12035 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.43□□□□□ -1.38
KRT3P12035 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.43□□□□□ -1.38
KRT3P12035 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
KRT3P12035 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRT3P12035 RN7SKP250-201ENST00000363924 321 ntBASIC6.43□□□□□ -1.38
KRT3P12035 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.43□□□□□ -1.38
KRT3P12035 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
KRT3P12035 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
KRT3P12035 RNA5SP156-201ENST00000410250 110 ntBASIC6.43□□□□□ -1.38
KRT3P12035 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.43□□□□□ -1.38
KRT3P12035 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.43□□□□□ -1.38
KRT3P12035 NME1P1-201ENST00000420914 382 ntBASIC6.43□□□□□ -1.38
KRT3P12035 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
KRT3P12035 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.43□□□□□ -1.38
KRT3P12035 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.43□□□□□ -1.38
KRT3P12035 AL445687.2-201ENST00000458156 728 ntBASIC6.43□□□□□ -1.38
KRT3P12035 AC098818.1-201ENST00000478593 252 ntBASIC6.43□□□□□ -1.38
KRT3P12035 AL035690.1-201ENST00000490892 383 ntBASIC6.43□□□□□ -1.38
KRT3P12035 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.43□□□□□ -1.38
KRT3P12035 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.43□□□□□ -1.38
KRT3P12035 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.43□□□□□ -1.38
KRT3P12035 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.43□□□□□ -1.38
KRT3P12035 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.43□□□□□ -1.38
KRT3P12035 AC021269.1-201ENST00000526860 705 ntBASIC6.43□□□□□ -1.38
KRT3P12035 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.43□□□□□ -1.38
KRT3P12035 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
KRT3P12035 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.43□□□□□ -1.38
KRT3P12035 GLYATL1P2-202ENST00000588046 902 ntBASIC6.43□□□□□ -1.38
KRT3P12035 AC009120.7-201ENST00000623452 780 ntBASIC6.43□□□□□ -1.38
KRT3P12035 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.43□□□□□ -1.38
KRT3P12035 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
KRT3P12035 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
KRT3P12035 AL078595.2-201ENST00000605309 1780 ntBASIC6.43□□□□□ -1.38
KRT3P12035 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.43□□□□□ -1.38
KRT3P12035 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
KRT3P12035 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
KRT3P12035 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.43□□□□□ -1.38
KRT3P12035 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
KRT3P12035 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
KRT3P12035 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
KRT3P12035 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
KRT3P12035 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
KRT3P12035 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
KRT3P12035 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
KRT3P12035 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
KRT3P12035 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
KRT3P12035 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
KRT3P12035 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
KRT3P12035 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.42□□□□□ -1.38
KRT3P12035 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.42□□□□□ -1.38
KRT3P12035 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
KRT3P12035 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
KRT3P12035 RN7SKP108-201ENST00000411367 328 ntBASIC6.42□□□□□ -1.38
KRT3P12035 SMC4P1-201ENST00000414479 527 ntBASIC6.42□□□□□ -1.38
KRT3P12035 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms