Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC4P09017 AL096711.1-201ENST00000404780 554 ntBASIC6.01□□□□□ -1.45
HOXC4P09017 OR2W4P-201ENST00000406496 926 ntBASIC6.01□□□□□ -1.45
HOXC4P09017 SLC20A1P1-201ENST00000413906 956 ntBASIC6.01□□□□□ -1.45
HOXC4P09017 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.01□□□□□ -1.45
HOXC4P09017 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.01□□□□□ -1.45
HOXC4P09017 BX284632.2-201ENST00000421091 399 ntBASIC6.01□□□□□ -1.45
HOXC4P09017 GAPDHP75-201ENST00000433910 943 ntBASIC6.01□□□□□ -1.45
HOXC4P09017 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.01□□□□□ -1.45
HOXC4P09017 AL445466.1-201ENST00000448432 357 ntBASIC6.01□□□□□ -1.45
HOXC4P09017 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.01□□□□□ -1.45
HOXC4P09017 AC084754.1-201ENST00000463466 464 ntBASIC6.01□□□□□ -1.45
HOXC4P09017 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.01□□□□□ -1.45
HOXC4P09017 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC4P09017 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.01□□□□□ -1.45
HOXC4P09017 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.01□□□□□ -1.45
HOXC4P09017 RNA5SP271-201ENST00000516700 88 ntBASIC6.01□□□□□ -1.45
HOXC4P09017 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.01□□□□□ -1.45
HOXC4P09017 OR56A7P-201ENST00000524865 941 ntBASIC6.01□□□□□ -1.45
HOXC4P09017 AP000648.1-201ENST00000529682 397 ntBASIC6.01□□□□□ -1.45
HOXC4P09017 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.01□□□□□ -1.45
HOXC4P09017 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.01□□□□□ -1.45
HOXC4P09017 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.01□□□□□ -1.45
HOXC4P09017 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.01□□□□□ -1.45
HOXC4P09017 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
HOXC4P09017 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.01□□□□□ -1.45
HOXC4P09017 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.01□□□□□ -1.45
HOXC4P09017 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.01□□□□□ -1.45
HOXC4P09017 AL683813.2-201ENST00000605245 502 ntBASIC6.01□□□□□ -1.45
HOXC4P09017 AL031601.1-201ENST00000605702 394 ntBASIC6.01□□□□□ -1.45
HOXC4P09017 MIR6809-201ENST00000612189 116 ntBASIC6.01□□□□□ -1.45
HOXC4P09017 AC096708.4-201ENST00000620563 552 ntBASIC6.01□□□□□ -1.45
HOXC4P09017 AL136228.1-201ENST00000622221 319 ntBASIC6.01□□□□□ -1.45
HOXC4P09017 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
HOXC4P09017 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.01□□□□□ -1.45
HOXC4P09017 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.01□□□□□ -1.45
HOXC4P09017 LINC01616-201ENST00000561816 2280 ntBASIC6.01□□□□□ -1.45
HOXC4P09017 AP000432.2-201ENST00000624164 2048 ntBASIC6.01□□□□□ -1.45
HOXC4P09017 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
HOXC4P09017 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.01□□□□□ -1.45
HOXC4P09017 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.01□□□□□ -1.45
HOXC4P09017 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
HOXC4P09017 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6□□□□□ -1.45
HOXC4P09017 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HOXC4P09017 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6□□□□□ -1.45
HOXC4P09017 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
HOXC4P09017 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HOXC4P09017 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6□□□□□ -1.45
HOXC4P09017 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
HOXC4P09017 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
HOXC4P09017 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6□□□□□ -1.45
HOXC4P09017 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
HOXC4P09017 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
HOXC4P09017 OR7E25P-201ENST00000344844 931 ntBASIC6□□□□□ -1.45
HOXC4P09017 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HOXC4P09017 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6□□□□□ -1.45
HOXC4P09017 RNA5SP273-201ENST00000362484 113 ntBASIC6□□□□□ -1.45
HOXC4P09017 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6□□□□□ -1.45
HOXC4P09017 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC6□□□□□ -1.45
HOXC4P09017 RPL35AP3-201ENST00000414680 288 ntBASIC6□□□□□ -1.45
HOXC4P09017 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
HOXC4P09017 TUBB4BP6-201ENST00000437576 479 ntBASIC6□□□□□ -1.45
HOXC4P09017 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6□□□□□ -1.45
HOXC4P09017 AC016724.1-201ENST00000453215 421 ntBASIC6□□□□□ -1.45
HOXC4P09017 GEMIN2P1-201ENST00000454246 752 ntBASIC6□□□□□ -1.45
HOXC4P09017 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6□□□□□ -1.45
HOXC4P09017 RN7SL165P-201ENST00000477476 291 ntBASIC6□□□□□ -1.45
HOXC4P09017 RN7SL193P-201ENST00000491708 276 ntBASIC6□□□□□ -1.45
HOXC4P09017 AC083795.1-201ENST00000491760 320 ntBASIC6□□□□□ -1.45
HOXC4P09017 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6□□□□□ -1.45
HOXC4P09017 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6□□□□□ -1.45
HOXC4P09017 AC110056.1-201ENST00000525759 911 ntBASIC6□□□□□ -1.45
HOXC4P09017 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6□□□□□ -1.45
HOXC4P09017 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6□□□□□ -1.45
HOXC4P09017 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6□□□□□ -1.45
HOXC4P09017 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6□□□□□ -1.45
HOXC4P09017 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6□□□□□ -1.45
HOXC4P09017 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6□□□□□ -1.45
HOXC4P09017 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6□□□□□ -1.45
HOXC4P09017 AC119403.2-201ENST00000590960 598 ntBASIC6□□□□□ -1.45
HOXC4P09017 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6□□□□□ -1.45
HOXC4P09017 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6□□□□□ -1.45
HOXC4P09017 AC119674.1-217ENST00000641942 1086 ntBASIC6□□□□□ -1.45
HOXC4P09017 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
HOXC4P09017 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
HOXC4P09017 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6□□□□□ -1.45
HOXC4P09017 AC130360.2-201ENST00000533477 1556 ntBASIC6□□□□□ -1.45
HOXC4P09017 AC007159.1-201ENST00000566529 4706 ntBASIC6□□□□□ -1.45
HOXC4P09017 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
HOXC4P09017 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HOXC4P09017 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HOXC4P09017 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
HOXC4P09017 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6□□□□□ -1.45
HOXC4P09017 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6□□□□□ -1.45
HOXC4P09017 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HOXC4P09017 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
HOXC4P09017 AOX3P-204ENST00000491025 2107 ntBASIC5.99□□□□□ -1.45
HOXC4P09017 AC012254.3-201ENST00000591183 2117 ntBASIC5.99□□□□□ -1.45
HOXC4P09017 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.99□□□□□ -1.45
HOXC4P09017 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms