Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AL355377.1-201ENST00000621125 1653 ntBASIC6.1□□□□□ -1.43
HLA-DQB2P05538 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HLA-DQB2P05538 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.1□□□□□ -1.43
HLA-DQB2P05538 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DQB2P05538 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 GNL2P1-201ENST00000451274 2190 ntBASIC6.09□□□□□ -1.43
HLA-DQB2P05538 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 RNU1-59P-201ENST00000364829 162 ntBASIC6.09□□□□□ -1.43
HLA-DQB2P05538 RPL23AP17-201ENST00000401064 499 ntBASIC6.09□□□□□ -1.43
HLA-DQB2P05538 AL096800.1-201ENST00000405326 893 ntBASIC6.09□□□□□ -1.43
HLA-DQB2P05538 MYL6P5-201ENST00000412707 459 ntBASIC6.09□□□□□ -1.43
HLA-DQB2P05538 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 AL365220.1-201ENST00000432923 399 ntBASIC6.09□□□□□ -1.43
HLA-DQB2P05538 CUBNP2-201ENST00000443534 1139 ntBASIC6.09□□□□□ -1.43
HLA-DQB2P05538 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 AC098847.1-201ENST00000473094 348 ntBASIC6.09□□□□□ -1.43
HLA-DQB2P05538 AC083795.1-201ENST00000491760 320 ntBASIC6.09□□□□□ -1.43
HLA-DQB2P05538 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 PRMT5P1-201ENST00000514351 598 ntBASIC6.09□□□□□ -1.43
HLA-DQB2P05538 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 OR7E158P-201ENST00000524483 910 ntBASIC6.09□□□□□ -1.43
HLA-DQB2P05538 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 AL049779.3-201ENST00000557141 606 ntBASIC6.09□□□□□ -1.43
HLA-DQB2P05538 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 AC026826.3-201ENST00000561747 158 ntBASIC6.09□□□□□ -1.43
HLA-DQB2P05538 U1.25-201ENST00000614085 162 ntBASIC6.09□□□□□ -1.43
HLA-DQB2P05538 U1.34-201ENST00000618578 162 ntBASIC6.09□□□□□ -1.43
HLA-DQB2P05538 U1.31-201ENST00000620022 160 ntBASIC6.09□□□□□ -1.43
HLA-DQB2P05538 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DQB2P05538 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
HLA-DQB2P05538 AC093225.1-201ENST00000506867 1408 ntBASIC6.08□□□□□ -1.44
HLA-DQB2P05538 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 RNA5SP211-201ENST00000365516 117 ntBASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 RPL35AP3-201ENST00000414680 288 ntBASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 RPL6P30-201ENST00000443382 862 ntBASIC6.08□□□□□ -1.44
HLA-DQB2P05538 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AC009963.3-201ENST00000458090 486 ntBASIC6.08□□□□□ -1.44
HLA-DQB2P05538 CTSLP6-201ENST00000458273 1002 ntBASIC6.08□□□□□ -1.44
HLA-DQB2P05538 RN7SL269P-201ENST00000467795 305 ntBASIC6.08□□□□□ -1.44
HLA-DQB2P05538 RPL37P23-201ENST00000492641 294 ntBASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 LDHAP1-201ENST00000509421 992 ntBASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 RN7SKP288-201ENST00000516227 268 ntBASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AC087360.1-201ENST00000518788 616 ntBASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AC011853.1-201ENST00000518911 454 ntBASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AC110056.1-201ENST00000525759 911 ntBASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AC006512.2-201ENST00000543250 486 ntBASIC6.08□□□□□ -1.44
HLA-DQB2P05538 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AC018558.5-201ENST00000565840 952 ntBASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AC002310.3-201ENST00000569728 723 ntBASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.08□□□□□ -1.44
HLA-DQB2P05538 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms