Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL1A1P02452 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL1A1P02452 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL1A1P02452 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL1A1P02452 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL1A1P02452 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL1A1P02452 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC7.25□□□□□ -1.25
COL1A1P02452 NEPNP-201ENST00000404786 1371 ntBASIC7.25□□□□□ -1.25
COL1A1P02452 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL1A1P02452 RPS2P45-201ENST00000469997 2057 ntBASIC7.24□□□□□ -1.25
COL1A1P02452 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL1A1P02452 AC016583.1-201ENST00000624221 2431 ntBASIC7.24□□□□□ -1.25
COL1A1P02452 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL1A1P02452 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
COL1A1P02452 RNA5SP211-201ENST00000365516 117 ntBASIC7.24□□□□□ -1.25
COL1A1P02452 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
COL1A1P02452 AC016739.1-201ENST00000405359 345 ntBASIC7.24□□□□□ -1.25
COL1A1P02452 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC7.24□□□□□ -1.25
COL1A1P02452 TSACC-207ENST00000470342 601 ntTSL 2 BASIC7.24□□□□□ -1.25
COL1A1P02452 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL1A1P02452 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC7.24□□□□□ -1.25
COL1A1P02452 PCNAP4-201ENST00000532690 730 ntBASIC7.24□□□□□ -1.25
COL1A1P02452 AP001496.3-201ENST00000580230 913 ntBASIC7.24□□□□□ -1.25
COL1A1P02452 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC7.24□□□□□ -1.25
COL1A1P02452 AC027334.1-201ENST00000603257 310 ntBASIC7.24□□□□□ -1.25
COL1A1P02452 OR11H2-202ENST00000641517 1085 ntBASIC7.24□□□□□ -1.25
COL1A1P02452 AC079776.5-201ENST00000641920 211 ntBASIC7.24□□□□□ -1.25
COL1A1P02452 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL1A1P02452 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL1A1P02452 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL1A1P02452 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL1A1P02452 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL1A1P02452 WDR95P-201ENST00000425638 1542 ntBASIC7.24□□□□□ -1.25
COL1A1P02452 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL1A1P02452 AC022034.1-201ENST00000512867 2156 ntBASIC7.24□□□□□ -1.25
COL1A1P02452 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL1A1P02452 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.24□□□□□ -1.25
COL1A1P02452 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
COL1A1P02452 AC092724.1-201ENST00000624623 3397 ntBASIC7.24□□□□□ -1.25
COL1A1P02452 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL1A1P02452 AC119674.1-213ENST00000641177 1386 ntBASIC7.24□□□□□ -1.25
COL1A1P02452 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL1A1P02452 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
COL1A1P02452 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.24□□□□□ -1.25
COL1A1P02452 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL1A1P02452 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.24□□□□□ -1.25
COL1A1P02452 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
COL1A1P02452 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.24□□□□□ -1.25
COL1A1P02452 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL1A1P02452 OR9K1P-201ENST00000326513 941 ntBASIC7.24□□□□□ -1.25
COL1A1P02452 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.24□□□□□ -1.25
COL1A1P02452 MIR105-2-201ENST00000385083 81 ntBASIC7.24□□□□□ -1.25
COL1A1P02452 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.24□□□□□ -1.25
COL1A1P02452 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.24□□□□□ -1.25
COL1A1P02452 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.24□□□□□ -1.25
COL1A1P02452 AK4P4-201ENST00000419465 646 ntBASIC7.24□□□□□ -1.25
COL1A1P02452 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC7.24□□□□□ -1.25
COL1A1P02452 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
COL1A1P02452 AC023818.1-201ENST00000498379 384 ntBASIC7.24□□□□□ -1.25
COL1A1P02452 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
COL1A1P02452 CASP5-209ENST00000531367 879 ntTSL 5 BASIC7.24□□□□□ -1.25
COL1A1P02452 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.24□□□□□ -1.25
COL1A1P02452 AL589674.2-201ENST00000604304 337 ntBASIC7.24□□□□□ -1.25
COL1A1P02452 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC7.24□□□□□ -1.25
COL1A1P02452 AP000864.1-201ENST00000609424 650 ntBASIC7.24□□□□□ -1.25
COL1A1P02452 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.24□□□□□ -1.25
COL1A1P02452 SDR42E1P1-201ENST00000611327 477 ntBASIC7.24□□□□□ -1.25
COL1A1P02452 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.24□□□□□ -1.25
COL1A1P02452 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC7.24□□□□□ -1.25
COL1A1P02452 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL1A1P02452 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL1A1P02452 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.23□□□□□ -1.25
COL1A1P02452 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL1A1P02452 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
COL1A1P02452 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL1A1P02452 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
COL1A1P02452 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL1A1P02452 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.23□□□□□ -1.25
COL1A1P02452 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL1A1P02452 AC061975.7-201ENST00000592016 2692 ntBASIC7.23□□□□□ -1.25
COL1A1P02452 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL1A1P02452 CCNT2P1-201ENST00000423082 1315 ntBASIC7.23□□□□□ -1.25
COL1A1P02452 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.23□□□□□ -1.25
COL1A1P02452 AL161901.1-201ENST00000624954 3425 ntBASIC7.23□□□□□ -1.25
COL1A1P02452 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.23□□□□□ -1.25
COL1A1P02452 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL1A1P02452 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC7.23□□□□□ -1.25
COL1A1P02452 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL1A1P02452 AL163193.1-201ENST00000444895 788 ntBASIC7.23□□□□□ -1.25
COL1A1P02452 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL1A1P02452 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC7.23□□□□□ -1.25
COL1A1P02452 AC244502.2-201ENST00000543361 851 ntBASIC7.23□□□□□ -1.25
COL1A1P02452 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC7.23□□□□□ -1.25
COL1A1P02452 SMARCE1P3-201ENST00000553649 1231 ntBASIC7.23□□□□□ -1.25
COL1A1P02452 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.23□□□□□ -1.25
COL1A1P02452 TXNP4-201ENST00000575018 310 ntBASIC7.23□□□□□ -1.25
COL1A1P02452 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC7.23□□□□□ -1.25
COL1A1P02452 AC091193.1-201ENST00000604640 448 ntBASIC7.23□□□□□ -1.25
COL1A1P02452 AL021707.7-201ENST00000607991 416 ntBASIC7.23□□□□□ -1.25
COL1A1P02452 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms