Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.96□□□□□ -1.46
TNFP01375 OR6M2P-201ENST00000529831 871 ntBASIC5.96□□□□□ -1.46
TNFP01375 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.96□□□□□ -1.46
TNFP01375 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.96□□□□□ -1.46
TNFP01375 MIR3614-201ENST00000581261 86 ntBASIC5.96□□□□□ -1.46
TNFP01375 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.96□□□□□ -1.46
TNFP01375 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.96□□□□□ -1.46
TNFP01375 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TNFP01375 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TNFP01375 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
TNFP01375 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC5.96□□□□□ -1.46
TNFP01375 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TNFP01375 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
TNFP01375 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TNFP01375 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
TNFP01375 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TNFP01375 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TNFP01375 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.46
TNFP01375 AC011815.2-201ENST00000618230 2021 ntBASIC5.96□□□□□ -1.46
TNFP01375 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TNFP01375 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.96□□□□□ -1.46
TNFP01375 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
TNFP01375 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
TNFP01375 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.95□□□□□ -1.46
TNFP01375 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TNFP01375 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.95□□□□□ -1.46
TNFP01375 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.95□□□□□ -1.46
TNFP01375 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
TNFP01375 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TNFP01375 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC5.95□□□□□ -1.46
TNFP01375 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TNFP01375 AC012254.3-201ENST00000591183 2117 ntBASIC5.95□□□□□ -1.46
TNFP01375 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TNFP01375 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
TNFP01375 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
TNFP01375 TMSB4XP2-201ENST00000335179 210 ntBASIC5.95□□□□□ -1.46
TNFP01375 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TNFP01375 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TNFP01375 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
TNFP01375 SNRPEP6-201ENST00000407465 277 ntBASIC5.95□□□□□ -1.46
TNFP01375 RN7SKP161-201ENST00000411110 305 ntBASIC5.95□□□□□ -1.46
TNFP01375 AL035660.1-201ENST00000422041 222 ntBASIC5.95□□□□□ -1.46
TNFP01375 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.95□□□□□ -1.46
TNFP01375 NDUFS5P5-201ENST00000437256 321 ntBASIC5.95□□□□□ -1.46
TNFP01375 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.95□□□□□ -1.46
TNFP01375 RAB28P2-201ENST00000454299 641 ntBASIC5.95□□□□□ -1.46
TNFP01375 RN7SL352P-201ENST00000466002 277 ntBASIC5.95□□□□□ -1.46
TNFP01375 AC011476.1-201ENST00000466725 307 ntBASIC5.95□□□□□ -1.46
TNFP01375 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.95□□□□□ -1.46
TNFP01375 AC096754.1-201ENST00000508904 818 ntBASIC5.95□□□□□ -1.46
TNFP01375 AC253576.1-201ENST00000511645 1156 ntBASIC5.95□□□□□ -1.46
TNFP01375 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.95□□□□□ -1.46
TNFP01375 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.95□□□□□ -1.46
TNFP01375 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.95□□□□□ -1.46
TNFP01375 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.95□□□□□ -1.46
TNFP01375 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.95□□□□□ -1.46
TNFP01375 RNU4ATAC-201ENST00000580972 127 ntBASIC5.95□□□□□ -1.46
TNFP01375 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
TNFP01375 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.95□□□□□ -1.46
TNFP01375 AC020916.2-201ENST00000591242 360 ntBASIC5.95□□□□□ -1.46
TNFP01375 AL021368.3-201ENST00000607119 578 ntBASIC5.95□□□□□ -1.46
TNFP01375 AL136131.3-201ENST00000607600 188 ntBASIC5.95□□□□□ -1.46
TNFP01375 MIR6809-201ENST00000612189 116 ntBASIC5.95□□□□□ -1.46
TNFP01375 TMEM75-201ENST00000624314 2165 ntBASIC5.95□□□□□ -1.46
TNFP01375 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.95□□□□□ -1.46
TNFP01375 AC119674.1-202ENST00000641333 1860 ntBASIC5.95□□□□□ -1.46
TNFP01375 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
TNFP01375 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.95□□□□□ -1.46
TNFP01375 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TNFP01375 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
TNFP01375 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
TNFP01375 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
TNFP01375 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.95□□□□□ -1.46
TNFP01375 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TNFP01375 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
TNFP01375 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TNFP01375 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.95□□□□□ -1.46
TNFP01375 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TNFP01375 AC092692.1-201ENST00000623625 2595 ntBASIC5.95□□□□□ -1.46
TNFP01375 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
TNFP01375 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
TNFP01375 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
TNFP01375 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TNFP01375 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.94□□□□□ -1.46
TNFP01375 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TNFP01375 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.94□□□□□ -1.46
TNFP01375 DNM1P47-203ENST00000571780 12667 ntBASIC5.94□□□□□ -1.46
TNFP01375 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.94□□□□□ -1.46
TNFP01375 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.94□□□□□ -1.46
TNFP01375 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
TNFP01375 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
TNFP01375 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TNFP01375 RN7SKP78-201ENST00000364711 318 ntBASIC5.94□□□□□ -1.46
TNFP01375 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TNFP01375 GAPDHP75-201ENST00000433910 943 ntBASIC5.94□□□□□ -1.46
TNFP01375 RPL23AP19-201ENST00000436229 369 ntBASIC5.94□□□□□ -1.46
TNFP01375 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.94□□□□□ -1.46
TNFP01375 AC073109.1-201ENST00000445066 978 ntBASIC5.94□□□□□ -1.46
TNFP01375 RPL31P15-201ENST00000449770 338 ntBASIC5.94□□□□□ -1.46
TNFP01375 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms