Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AL512356.3-201ENST00000623005 461 ntBASIC6.15□□□□□ -1.42
RIPK2O43353 AC079776.5-201ENST00000641920 211 ntBASIC6.15□□□□□ -1.42
RIPK2O43353 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
RIPK2O43353 AC011416.1-201ENST00000514947 1732 ntBASIC6.15□□□□□ -1.42
RIPK2O43353 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RIPK2O43353 AC114774.1-201ENST00000507410 1770 ntBASIC6.15□□□□□ -1.43
RIPK2O43353 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RIPK2O43353 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RIPK2O43353 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.15□□□□□ -1.43
RIPK2O43353 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RIPK2O43353 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RIPK2O43353 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RIPK2O43353 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RIPK2O43353 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.43
RIPK2O43353 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
RIPK2O43353 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RIPK2O43353 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.15□□□□□ -1.43
RIPK2O43353 AC011503.2-201ENST00000594230 1500 ntBASIC6.15□□□□□ -1.43
RIPK2O43353 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RIPK2O43353 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RIPK2O43353 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RIPK2O43353 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.14□□□□□ -1.43
RIPK2O43353 THAP12P9-201ENST00000503971 2360 ntBASIC6.14□□□□□ -1.43
RIPK2O43353 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RIPK2O43353 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RIPK2O43353 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
RIPK2O43353 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RIPK2O43353 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RIPK2O43353 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RIPK2O43353 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RIPK2O43353 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RIPK2O43353 RN7SKP39-201ENST00000410773 322 ntBASIC6.14□□□□□ -1.43
RIPK2O43353 MYL6P5-201ENST00000412707 459 ntBASIC6.14□□□□□ -1.43
RIPK2O43353 METTL15P3-201ENST00000415522 1221 ntBASIC6.14□□□□□ -1.43
RIPK2O43353 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.14□□□□□ -1.43
RIPK2O43353 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.14□□□□□ -1.43
RIPK2O43353 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.14□□□□□ -1.43
RIPK2O43353 FRG2FP-204ENST00000453982 852 ntBASIC6.14□□□□□ -1.43
RIPK2O43353 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.14□□□□□ -1.43
RIPK2O43353 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RIPK2O43353 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.14□□□□□ -1.43
RIPK2O43353 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.14□□□□□ -1.43
RIPK2O43353 AC093816.1-201ENST00000515076 913 ntBASIC6.14□□□□□ -1.43
RIPK2O43353 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RIPK2O43353 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.14□□□□□ -1.43
RIPK2O43353 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
RIPK2O43353 OR4C49P-201ENST00000563891 900 ntBASIC6.14□□□□□ -1.43
RIPK2O43353 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.14□□□□□ -1.43
RIPK2O43353 RPL7AP69-201ENST00000595306 806 ntBASIC6.14□□□□□ -1.43
RIPK2O43353 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.14□□□□□ -1.43
RIPK2O43353 SNORA74.4-201ENST00000607595 199 ntBASIC6.14□□□□□ -1.43
RIPK2O43353 AL589743.6-201ENST00000611025 117 ntBASIC6.14□□□□□ -1.43
RIPK2O43353 MIR6732-201ENST00000619365 60 ntBASIC6.14□□□□□ -1.43
RIPK2O43353 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC6.14□□□□□ -1.43
RIPK2O43353 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.14□□□□□ -1.43
RIPK2O43353 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RIPK2O43353 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.14□□□□□ -1.43
RIPK2O43353 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RIPK2O43353 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.14□□□□□ -1.43
RIPK2O43353 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RIPK2O43353 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.14□□□□□ -1.43
RIPK2O43353 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RIPK2O43353 FANCD2P2-201ENST00000437591 1400 ntBASIC6.14□□□□□ -1.43
RIPK2O43353 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
RIPK2O43353 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.14□□□□□ -1.43
RIPK2O43353 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.14□□□□□ -1.43
RIPK2O43353 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
RIPK2O43353 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RIPK2O43353 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RIPK2O43353 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RIPK2O43353 AC009220.2-201ENST00000489759 1751 ntBASIC6.13□□□□□ -1.43
RIPK2O43353 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.13□□□□□ -1.43
RIPK2O43353 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RIPK2O43353 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
RIPK2O43353 AC007842.1-201ENST00000597336 2039 ntBASIC6.13□□□□□ -1.43
RIPK2O43353 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RIPK2O43353 OR5M2P-202ENST00000641241 4242 ntBASIC6.13□□□□□ -1.43
RIPK2O43353 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RIPK2O43353 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RIPK2O43353 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RIPK2O43353 RNA5SP346-201ENST00000363541 121 ntBASIC6.13□□□□□ -1.43
RIPK2O43353 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.13□□□□□ -1.43
RIPK2O43353 SNORA7A-201ENST00000384765 139 ntBASIC6.13□□□□□ -1.43
RIPK2O43353 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.13□□□□□ -1.43
RIPK2O43353 AL161742.1-201ENST00000418154 584 ntBASIC6.13□□□□□ -1.43
RIPK2O43353 NPM1P48-201ENST00000436002 853 ntBASIC6.13□□□□□ -1.43
RIPK2O43353 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.13□□□□□ -1.43
RIPK2O43353 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.13□□□□□ -1.43
RIPK2O43353 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RIPK2O43353 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.13□□□□□ -1.43
RIPK2O43353 RN7SL413P-201ENST00000482700 297 ntBASIC6.13□□□□□ -1.43
RIPK2O43353 PDCL3P4-201ENST00000489621 720 ntBASIC6.13□□□□□ -1.43
RIPK2O43353 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.13□□□□□ -1.43
RIPK2O43353 AC105391.1-201ENST00000503155 1045 ntBASIC6.13□□□□□ -1.43
RIPK2O43353 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RIPK2O43353 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.13□□□□□ -1.43
RIPK2O43353 KHDC1P1-201ENST00000511053 508 ntBASIC6.13□□□□□ -1.43
RIPK2O43353 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.13□□□□□ -1.43
RIPK2O43353 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.13□□□□□ -1.43
RIPK2O43353 AC078899.1-201ENST00000521432 1185 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms