Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 RN7SL382P-201ENST00000482631 282 ntBASIC7.19□□□□□ -1.26
CCDC66A2RUB6 AC015864.1-201ENST00000496512 544 ntBASIC7.19□□□□□ -1.26
CCDC66A2RUB6 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 KCTD9P6-201ENST00000522306 950 ntBASIC7.19□□□□□ -1.26
CCDC66A2RUB6 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 AC084824.2-201ENST00000548906 345 ntBASIC7.19□□□□□ -1.26
CCDC66A2RUB6 AC087888.1-201ENST00000550884 1254 ntBASIC7.19□□□□□ -1.26
CCDC66A2RUB6 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 AC026458.1-201ENST00000564330 438 ntBASIC7.19□□□□□ -1.26
CCDC66A2RUB6 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 MIR4509-3-201ENST00000578671 94 ntBASIC7.19□□□□□ -1.26
CCDC66A2RUB6 MIR4509-2-201ENST00000583920 94 ntBASIC7.19□□□□□ -1.26
CCDC66A2RUB6 AC005242.1-201ENST00000585658 438 ntBASIC7.19□□□□□ -1.26
CCDC66A2RUB6 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 MIR4509-1-201ENST00000618224 94 ntBASIC7.19□□□□□ -1.26
CCDC66A2RUB6 AC087894.3-201ENST00000623682 349 ntBASIC7.19□□□□□ -1.26
CCDC66A2RUB6 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 AC120349.3-201ENST00000624377 529 ntBASIC7.19□□□□□ -1.26
CCDC66A2RUB6 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 AC027279.1-201ENST00000568885 4284 ntBASIC7.19□□□□□ -1.26
CCDC66A2RUB6 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 AL451064.2-201ENST00000623514 1654 ntBASIC7.19□□□□□ -1.26
CCDC66A2RUB6 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC66A2RUB6 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 AC009120.2-204ENST00000621548 2032 ntBASIC7.18□□□□□ -1.26
CCDC66A2RUB6 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 TCP1P3-201ENST00000414406 1498 ntBASIC7.18□□□□□ -1.26
CCDC66A2RUB6 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 AC092070.2-203ENST00000598377 3644 ntBASIC7.18□□□□□ -1.26
CCDC66A2RUB6 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 FAM32BP-201ENST00000344033 333 ntBASIC7.18□□□□□ -1.26
CCDC66A2RUB6 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 MIR365B-201ENST00000362317 111 ntBASIC7.18□□□□□ -1.26
CCDC66A2RUB6 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 RNA5SP231-201ENST00000410496 138 ntBASIC7.18□□□□□ -1.26
CCDC66A2RUB6 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 ARL2BPP3-201ENST00000421226 480 ntBASIC7.18□□□□□ -1.26
CCDC66A2RUB6 AL606495.1-201ENST00000422100 813 ntBASIC7.18□□□□□ -1.26
CCDC66A2RUB6 ZBTB8OSP2-201ENST00000423890 504 ntBASIC7.18□□□□□ -1.26
CCDC66A2RUB6 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 RPL5P2-201ENST00000429598 854 ntBASIC7.18□□□□□ -1.26
CCDC66A2RUB6 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 AC019080.2-201ENST00000453859 394 ntBASIC7.18□□□□□ -1.26
CCDC66A2RUB6 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 GAPDHP53-201ENST00000458397 924 ntBASIC7.18□□□□□ -1.26
CCDC66A2RUB6 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 RN7SL561P-201ENST00000488553 281 ntBASIC7.18□□□□□ -1.26
CCDC66A2RUB6 MTCO1P31-201ENST00000506355 492 ntBASIC7.18□□□□□ -1.26
CCDC66A2RUB6 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 AC111000.6-201ENST00000514471 709 ntBASIC7.18□□□□□ -1.26
CCDC66A2RUB6 RN7SKP287-201ENST00000516546 266 ntBASIC7.18□□□□□ -1.26
CCDC66A2RUB6 OR56A7P-201ENST00000524865 941 ntBASIC7.18□□□□□ -1.26
CCDC66A2RUB6 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 NPM1P35-201ENST00000533043 868 ntBASIC7.18□□□□□ -1.26
CCDC66A2RUB6 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 AC004232.1-201ENST00000571388 208 ntBASIC7.18□□□□□ -1.26
CCDC66A2RUB6 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 AC090666.1-201ENST00000578241 445 ntBASIC7.18□□□□□ -1.26
CCDC66A2RUB6 AC090774.2-201ENST00000584708 322 ntBASIC7.18□□□□□ -1.26
CCDC66A2RUB6 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 AL031429.2-201ENST00000602605 649 ntBASIC7.18□□□□□ -1.26
CCDC66A2RUB6 COX6CP16-201ENST00000603667 216 ntBASIC7.18□□□□□ -1.26
CCDC66A2RUB6 FRG2MP-201ENST00000613317 856 ntBASIC7.18□□□□□ -1.26
CCDC66A2RUB6 AC116165.3-201ENST00000614524 400 ntBASIC7.18□□□□□ -1.26
CCDC66A2RUB6 AL356752.1-201ENST00000615844 593 ntBASIC7.18□□□□□ -1.26
CCDC66A2RUB6 AL161420.1-201ENST00000619393 264 ntBASIC7.18□□□□□ -1.26
CCDC66A2RUB6 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC66A2RUB6 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms