Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 KRT8P51-201ENST00000438938 274 ntBASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 AC092967.1-201ENST00000449016 481 ntBASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 OSTCP1-201ENST00000455507 450 ntBASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 RN7SL104P-201ENST00000498686 293 ntBASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 BTG1P1-201ENST00000540396 508 ntBASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 AL021368.3-201ENST00000607119 578 ntBASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 AC012676.3-201ENST00000614983 479 ntBASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 MIR6823-201ENST00000622118 61 ntBASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 AC022164.1-201ENST00000568767 2673 ntBASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 AP000473.2-201ENST00000602659 1537 ntBASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 SNORD1C-201ENST00000363315 78 ntBASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 RNA5SP77-201ENST00000365394 120 ntBASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 MIR433-201ENST00000384837 93 ntBASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 RNU11-6P-201ENST00000391127 133 ntBASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 RNA5SP198-201ENST00000410376 127 ntBASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 FAM183DP-201ENST00000421987 399 ntBASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 BX276092.6-201ENST00000430476 250 ntBASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 AC112492.2-201ENST00000432774 1030 ntBASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 LINC00328-2P-201ENST00000436585 219 ntBASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 BX276092.8-201ENST00000455722 250 ntBASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 RN7SL836P-201ENST00000476140 296 ntBASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 OR4D12P-201ENST00000509361 911 ntBASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 RN7SL230P-201ENST00000580835 303 ntBASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 AC010998.3-201ENST00000613871 631 ntBASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.65□□□□□ -1.5
TRAPPC4Q9Y296 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.65□□□□□ -1.51
TRAPPC4Q9Y296 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.65□□□□□ -1.51
TRAPPC4Q9Y296 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TRAPPC4Q9Y296 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TRAPPC4Q9Y296 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.65□□□□□ -1.51
TRAPPC4Q9Y296 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.65□□□□□ -1.51
TRAPPC4Q9Y296 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRAPPC4Q9Y296 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRAPPC4Q9Y296 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRAPPC4Q9Y296 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRAPPC4Q9Y296 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.65□□□□□ -1.51
TRAPPC4Q9Y296 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TRAPPC4Q9Y296 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TRAPPC4Q9Y296 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.65□□□□□ -1.51
TRAPPC4Q9Y296 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms