Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 AP005136.2-201ENST00000583253 1049 ntBASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 WBP1LP12-201ENST00000604449 331 ntBASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 AC016590.3-201ENST00000611171 753 ntBASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 MIR6823-201ENST00000622118 61 ntBASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 AC020656.2-201ENST00000613291 5309 ntBASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 MIR188-201ENST00000385034 86 ntBASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 MYL6P5-201ENST00000412707 459 ntBASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 RPL35AP31-201ENST00000418340 337 ntBASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 RPL12P12-201ENST00000424633 501 ntBASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 BX679664.2-201ENST00000439282 283 ntBASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 AC097359.1-201ENST00000447946 463 ntBASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 OR7E22P-201ENST00000478335 1035 ntBASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 MRPS5P3-201ENST00000515577 166 ntBASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 OR56A7P-201ENST00000524865 941 ntBASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 AL352984.2-201ENST00000611153 546 ntBASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 AC096861.1-201ENST00000616652 240 ntBASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 AP000547.3-204ENST00000588548 2523 ntBASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS29Q9UBQ0 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 SNORA21-201ENST00000362423 132 ntBASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 AL034417.1-201ENST00000399343 800 ntBASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 AL121977.1-201ENST00000401636 979 ntBASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 AC099782.1-201ENST00000425889 474 ntBASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 RPL34P27-201ENST00000428810 349 ntBASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 SEPT14P12-201ENST00000442280 560 ntBASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 AC007383.1-201ENST00000445875 636 ntBASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 ACA64.4-201ENST00000459070 127 ntBASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 RN7SL836P-201ENST00000476140 296 ntBASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 RPS27P20-201ENST00000492051 246 ntBASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 AC244502.2-201ENST00000543361 851 ntBASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 AC005899.7-201ENST00000618199 588 ntBASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 484.9 ms