Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.65□□□□□ -1.18
RTFDC1Q9BY42 AC008833.1-201ENST00000611633 691 ntBASIC7.65□□□□□ -1.18
RTFDC1Q9BY42 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC7.65□□□□□ -1.18
RTFDC1Q9BY42 AC130448.2-201ENST00000624082 374 ntBASIC7.65□□□□□ -1.18
RTFDC1Q9BY42 AC087269.2-201ENST00000641764 975 ntBASIC7.65□□□□□ -1.18
RTFDC1Q9BY42 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
RTFDC1Q9BY42 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.65□□□□□ -1.19
RTFDC1Q9BY42 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
RTFDC1Q9BY42 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.65□□□□□ -1.19
RTFDC1Q9BY42 AC127070.3-201ENST00000503695 3263 ntBASIC7.65□□□□□ -1.19
RTFDC1Q9BY42 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
RTFDC1Q9BY42 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 AC130360.2-201ENST00000533477 1556 ntBASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 AF287957.1-201ENST00000607368 1595 ntBASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 U3.43-201ENST00000410734 213 ntBASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 KIF4CP-201ENST00000422742 1279 ntBASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 NDUFA5P1-201ENST00000433858 341 ntBASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 AP006222.1-205ENST00000450734 457 ntBASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 RPS26P39-201ENST00000469206 341 ntBASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 OR8K2P-201ENST00000524645 927 ntBASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 AL008723.3-201ENST00000608926 449 ntBASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 AL162233.1-201ENST00000620014 944 ntBASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 AC080188.3-201ENST00000624842 748 ntBASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
RTFDC1Q9BY42 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 DPY19L1P1-201ENST00000417811 2594 ntBASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 RNU6-670P-201ENST00000364312 104 ntBASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 RN7SKP293-201ENST00000411389 296 ntBASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 CR848007.2-201ENST00000424918 787 ntBASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 AP000281.1-201ENST00000444036 316 ntBASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 TRIM60P16-201ENST00000444048 694 ntBASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 AC021269.1-201ENST00000526860 705 ntBASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 AC005244.1-201ENST00000582566 339 ntBASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 AC022106.1-201ENST00000612834 766 ntBASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 AP005431.1-201ENST00000618479 319 ntBASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 CGA-206ENST00000630630 832 ntTSL 2 BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 CUL4AP1-201ENST00000514750 1863 ntBASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
RTFDC1Q9BY42 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms