Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 AC130304.1-201ENST00000622942 2385 ntBASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 AC104581.5-201ENST00000624171 7141 ntBASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 AC137056.2-201ENST00000624055 1958 ntBASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 AK3P5-201ENST00000432033 519 ntBASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 AL138899.2-201ENST00000439139 499 ntBASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 H3F3AP5-201ENST00000475267 429 ntBASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 CCDC11P1-201ENST00000503137 1162 ntBASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 AC093524.1-201ENST00000564266 1094 ntBASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 AC011500.1-201ENST00000601963 469 ntBASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 AP001823.1-201ENST00000604056 1003 ntBASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 SNORA74.4-201ENST00000607595 199 ntBASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 TEX41-271ENST00000628213 993 ntTSL 5 BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 RN7SKP38-201ENST00000410782 309 ntBASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 RN7SKP166-201ENST00000410812 305 ntBASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 RPL7AP51-201ENST00000422016 760 ntBASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 AL451063.1-201ENST00000450164 1133 ntBASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 RAB28P2-201ENST00000454299 641 ntBASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 ACA64.4-201ENST00000459070 127 ntBASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 AC124945.1-201ENST00000485133 188 ntBASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 RPL23AP40-201ENST00000487630 390 ntBASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 TRBV5-2-201ENST00000489095 273 ntBASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 RN7SL568P-201ENST00000493069 298 ntBASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 OR7E99P-201ENST00000505750 922 ntBASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 AP001000.1-201ENST00000526843 742 ntBASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 HNRNPCP1-201ENST00000556181 766 ntBASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 NPM1P42-201ENST00000560329 862 ntBASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 AC004232.2-201ENST00000574245 821 ntBASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 OR1E3-201ENST00000575608 948 ntBASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 AC012676.3-201ENST00000614983 479 ntBASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 MIR6811-201ENST00000620409 58 ntBASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 AL591926.1-201ENST00000620542 217 ntBASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 AC138907.8-201ENST00000623981 2256 ntBASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 MAPK10-261ENST00000641050 3109 ntBASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms