Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 AC009729.1-201ENST00000548873 1133 ntBASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 AC090651.1-201ENST00000567865 634 ntBASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 MARK2P4-201ENST00000503381 2380 ntBASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 AP003486.1-201ENST00000525716 3994 ntBASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 OR52N3P-201ENST00000413417 934 ntBASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 AC023141.6-201ENST00000429418 337 ntBASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 BMS1P11-201ENST00000442351 885 ntBASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 AC112187.1-201ENST00000455837 479 ntBASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 BMS1P9-201ENST00000457640 885 ntBASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 AC073594.1-201ENST00000462065 364 ntBASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 TPT1P8-201ENST00000510120 555 ntBASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 AC005332.4-201ENST00000592752 579 ntBASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 AC073111.2-201ENST00000605657 1075 ntBASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 AC096586.2-201ENST00000610260 441 ntBASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 AC016590.3-201ENST00000611171 753 ntBASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 AC104763.3-201ENST00000613765 618 ntBASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 MIR7159-201ENST00000620587 66 ntBASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 AC027506.1-201ENST00000621395 198 ntBASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 AC003992.1-201ENST00000635364 557 ntBASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 OR5M2P-202ENST00000641241 4242 ntBASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 AL136984.1-201ENST00000607611 1893 ntBASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 AC022164.1-201ENST00000568767 2673 ntBASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
ATG4AQ8WYN0 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 TRAV35-201ENST00000390462 330 ntBASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 AC015977.1-201ENST00000418887 292 ntBASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 AP003385.1-201ENST00000426387 893 ntBASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 AL392003.1-201ENST00000434394 243 ntBASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 AC013410.1-201ENST00000436223 1232 ntBASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 AL645638.1-201ENST00000440519 361 ntBASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 TVP23BP2-201ENST00000455082 615 ntBASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 TREML3P-201ENST00000457327 501 ntBASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 RPL5P33-201ENST00000487833 905 ntBASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 RPL12P7-201ENST00000493832 494 ntBASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 AC008945.1-201ENST00000505144 499 ntBASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 HAUS1P1-201ENST00000505275 832 ntBASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 AC110760.3-202ENST00000515177 371 ntBASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 RNA5SP75-201ENST00000516841 111 ntBASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 307.3 ms