Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RNU2-5P-201ENST00000410533 180 ntBASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 AC022080.2-201ENST00000452932 533 ntBASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 CBX5P1-201ENST00000468470 561 ntBASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 AF305872.1-201ENST00000485217 471 ntBASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 NF1P12-201ENST00000549593 583 ntBASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 AC005519.1-201ENST00000554490 601 ntBASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 MIR4685-201ENST00000578185 69 ntBASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 AC027575.3-201ENST00000583058 2747 ntBASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 RNA5SP427-201ENST00000365323 119 ntBASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 RNU6-167P-201ENST00000384292 106 ntBASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 EEF1GP6-201ENST00000402309 905 ntBASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 USP24P1-201ENST00000433802 779 ntBASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 AL020997.1-201ENST00000446554 349 ntBASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 RN7SKP198-201ENST00000459286 306 ntBASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 RN7SL643P-201ENST00000471845 291 ntBASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 AC114940.1-201ENST00000512162 1265 ntBASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 NPM1P5-201ENST00000557228 838 ntBASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 AC026956.1-201ENST00000558741 396 ntBASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 AC005332.4-201ENST00000592752 579 ntBASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 AC025857.2-201ENST00000602711 238 ntBASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 AC073046.2-201ENST00000604756 527 ntBASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 AL137067.2-201ENST00000621202 131 ntBASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 AC132825.8-201ENST00000640783 297 ntBASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC71LQ8N9Z2 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms