Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.69□□□□□ -1.18
SYNE4Q8N205 AC073594.1-201ENST00000462065 364 ntBASIC7.69□□□□□ -1.18
SYNE4Q8N205 RN7SL269P-201ENST00000467795 305 ntBASIC7.69□□□□□ -1.18
SYNE4Q8N205 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
SYNE4Q8N205 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
SYNE4Q8N205 ATP5LP3-201ENST00000514223 304 ntBASIC7.69□□□□□ -1.18
SYNE4Q8N205 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC7.69□□□□□ -1.18
SYNE4Q8N205 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.69□□□□□ -1.18
SYNE4Q8N205 AC025423.2-201ENST00000537570 439 ntBASIC7.69□□□□□ -1.18
SYNE4Q8N205 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.69□□□□□ -1.18
SYNE4Q8N205 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.69□□□□□ -1.18
SYNE4Q8N205 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC7.69□□□□□ -1.18
SYNE4Q8N205 BNIP3P39-201ENST00000601077 554 ntBASIC7.69□□□□□ -1.18
SYNE4Q8N205 RPL12P48-201ENST00000605620 304 ntBASIC7.69□□□□□ -1.18
SYNE4Q8N205 AL136295.6-201ENST00000610486 658 ntBASIC7.69□□□□□ -1.18
SYNE4Q8N205 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.69□□□□□ -1.18
SYNE4Q8N205 AL138960.2-201ENST00000625145 535 ntBASIC7.69□□□□□ -1.18
SYNE4Q8N205 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC7.69□□□□□ -1.18
SYNE4Q8N205 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.69□□□□□ -1.18
SYNE4Q8N205 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE4Q8N205 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
SYNE4Q8N205 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
SYNE4Q8N205 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.69□□□□□ -1.18
SYNE4Q8N205 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE4Q8N205 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.69□□□□□ -1.18
SYNE4Q8N205 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE4Q8N205 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE4Q8N205 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE4Q8N205 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.69□□□□□ -1.18
SYNE4Q8N205 AC105235.1-201ENST00000623208 1816 ntBASIC7.68□□□□□ -1.18
SYNE4Q8N205 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SYNE4Q8N205 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.68□□□□□ -1.18
SYNE4Q8N205 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SYNE4Q8N205 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SYNE4Q8N205 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SYNE4Q8N205 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
SYNE4Q8N205 Z82209.2-201ENST00000623410 2012 ntBASIC7.68□□□□□ -1.18
SYNE4Q8N205 UGT2B27P-201ENST00000505092 1620 ntBASIC7.68□□□□□ -1.18
SYNE4Q8N205 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.68□□□□□ -1.18
SYNE4Q8N205 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
SYNE4Q8N205 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
SYNE4Q8N205 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SYNE4Q8N205 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
SYNE4Q8N205 RNA5SP375-201ENST00000362975 119 ntBASIC7.68□□□□□ -1.18
SYNE4Q8N205 MIR640-201ENST00000385086 96 ntBASIC7.68□□□□□ -1.18
SYNE4Q8N205 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC7.68□□□□□ -1.18
SYNE4Q8N205 AL035660.1-201ENST00000422041 222 ntBASIC7.68□□□□□ -1.18
SYNE4Q8N205 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.68□□□□□ -1.18
SYNE4Q8N205 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
SYNE4Q8N205 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.68□□□□□ -1.18
SYNE4Q8N205 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC7.68□□□□□ -1.18
SYNE4Q8N205 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SYNE4Q8N205 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.68□□□□□ -1.18
SYNE4Q8N205 MIR3189-201ENST00000578735 73 ntBASIC7.68□□□□□ -1.18
SYNE4Q8N205 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.68□□□□□ -1.18
SYNE4Q8N205 AL352984.2-201ENST00000611153 546 ntBASIC7.68□□□□□ -1.18
SYNE4Q8N205 SDR42E1P1-201ENST00000611327 477 ntBASIC7.68□□□□□ -1.18
SYNE4Q8N205 AC048344.4-201ENST00000619744 527 ntBASIC7.68□□□□□ -1.18
SYNE4Q8N205 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.68□□□□□ -1.18
SYNE4Q8N205 AC025809.2-201ENST00000625085 1802 ntBASIC7.68□□□□□ -1.18
SYNE4Q8N205 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SYNE4Q8N205 RBPJP7-201ENST00000442803 1447 ntBASIC7.68□□□□□ -1.18
SYNE4Q8N205 RBPJP5-201ENST00000449433 1447 ntBASIC7.68□□□□□ -1.18
SYNE4Q8N205 AC022905.1-201ENST00000503430 3048 ntBASIC7.68□□□□□ -1.18
SYNE4Q8N205 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.67□□□□□ -1.18
SYNE4Q8N205 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE4Q8N205 AC024651.2-201ENST00000562480 2098 ntBASIC7.67□□□□□ -1.18
SYNE4Q8N205 XIST-206ENST00000434839 2865 ntTSL 5 BASIC7.67□□□□□ -1.18
SYNE4Q8N205 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE4Q8N205 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE4Q8N205 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.67□□□□□ -1.18
SYNE4Q8N205 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
SYNE4Q8N205 AL391361.1-201ENST00000405580 489 ntBASIC7.67□□□□□ -1.18
SYNE4Q8N205 MTND2P15-201ENST00000418575 892 ntBASIC7.67□□□□□ -1.18
SYNE4Q8N205 AL445665.1-202ENST00000452436 324 ntBASIC7.67□□□□□ -1.18
SYNE4Q8N205 YWHAEP1-201ENST00000453697 763 ntBASIC7.67□□□□□ -1.18
SYNE4Q8N205 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE4Q8N205 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE4Q8N205 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE4Q8N205 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC7.67□□□□□ -1.18
SYNE4Q8N205 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE4Q8N205 AC079600.1-201ENST00000550326 297 ntBASIC7.67□□□□□ -1.18
SYNE4Q8N205 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.67□□□□□ -1.18
SYNE4Q8N205 AL158211.1-201ENST00000566763 763 ntBASIC7.67□□□□□ -1.18
SYNE4Q8N205 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.67□□□□□ -1.18
SYNE4Q8N205 BNIP3P35-201ENST00000604530 490 ntBASIC7.67□□□□□ -1.18
SYNE4Q8N205 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC7.67□□□□□ -1.18
SYNE4Q8N205 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE4Q8N205 AL137067.2-201ENST00000621202 131 ntBASIC7.67□□□□□ -1.18
SYNE4Q8N205 AC020923.1-201ENST00000624021 917 ntBASIC7.67□□□□□ -1.18
SYNE4Q8N205 AL590396.2-201ENST00000636511 1041 ntBASIC7.67□□□□□ -1.18
SYNE4Q8N205 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.67□□□□□ -1.18
SYNE4Q8N205 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE4Q8N205 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.67□□□□□ -1.18
SYNE4Q8N205 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
SYNE4Q8N205 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.67□□□□□ -1.18
SYNE4Q8N205 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE4Q8N205 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE4Q8N205 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
SYNE4Q8N205 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms