Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 RNA5SP453-201ENST00000362503 119 ntBASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 SNORA43.1-201ENST00000364863 140 ntBASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 RNA5SP485-201ENST00000365053 119 ntBASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 MORN2-202ENST00000409077 465 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 AC002127.1-201ENST00000421305 225 ntBASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 RARRES2P3-201ENST00000457739 473 ntBASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 RN7SL39P-201ENST00000462264 297 ntBASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 NPM1P28-201ENST00000492269 840 ntBASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 HMGN1P26-201ENST00000558737 303 ntBASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 AC020916.2-201ENST00000591242 360 ntBASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 DYNLL1P1-201ENST00000595442 269 ntBASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 AL157762.1-201ENST00000619612 415 ntBASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 AP000473.2-201ENST00000602659 1537 ntBASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 RNA5SP85-201ENST00000365378 119 ntBASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 ARSFP1-201ENST00000398758 477 ntBASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 AL121977.1-201ENST00000401636 979 ntBASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 RPS19P6-201ENST00000441327 433 ntBASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 RN7SL502P-201ENST00000481857 290 ntBASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 AC008055.1-201ENST00000547032 609 ntBASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 GLYATL1P2-202ENST00000588046 902 ntBASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 MIR132-201ENST00000591554 101 ntBASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 OR7A1P-202ENST00000641542 1158 ntBASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 AL359091.1-201ENST00000449048 1734 ntBASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC50Q8IVM0 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CCDC50Q8IVM0 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.46□□□□□ -1.37
CCDC50Q8IVM0 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CCDC50Q8IVM0 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CCDC50Q8IVM0 PPBPP2-201ENST00000513150 1362 ntBASIC6.46□□□□□ -1.37
CCDC50Q8IVM0 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
CCDC50Q8IVM0 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.46□□□□□ -1.37
CCDC50Q8IVM0 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
CCDC50Q8IVM0 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
CCDC50Q8IVM0 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
CCDC50Q8IVM0 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CCDC50Q8IVM0 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.46□□□□□ -1.37
CCDC50Q8IVM0 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC50Q8IVM0 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC50Q8IVM0 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.46□□□□□ -1.38
CCDC50Q8IVM0 SNORD94-201ENST00000386037 137 ntBASIC6.46□□□□□ -1.38
CCDC50Q8IVM0 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CCDC50Q8IVM0 RN7SKP121-201ENST00000410842 305 ntBASIC6.46□□□□□ -1.38
CCDC50Q8IVM0 DHFRP2-201ENST00000414224 547 ntBASIC6.46□□□□□ -1.38
CCDC50Q8IVM0 AC015977.1-201ENST00000418887 292 ntBASIC6.46□□□□□ -1.38
CCDC50Q8IVM0 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC50Q8IVM0 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC50Q8IVM0 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC50Q8IVM0 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC50Q8IVM0 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.46□□□□□ -1.38
CCDC50Q8IVM0 PA2G4P1-201ENST00000442248 1197 ntBASIC6.46□□□□□ -1.38
CCDC50Q8IVM0 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC50Q8IVM0 AC092601.1-201ENST00000444526 383 ntBASIC6.46□□□□□ -1.38
CCDC50Q8IVM0 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms