Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 AC140134.1-201ENST00000511830 3544 ntBASIC5.7□□□□□ -1.5
SHFQ7M4L6 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHFQ7M4L6 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SHFQ7M4L6 BX284613.1-201ENST00000452221 1641 ntBASIC5.7□□□□□ -1.5
SHFQ7M4L6 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SHFQ7M4L6 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHFQ7M4L6 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHFQ7M4L6 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHFQ7M4L6 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHFQ7M4L6 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHFQ7M4L6 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHFQ7M4L6 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHFQ7M4L6 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHFQ7M4L6 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHFQ7M4L6 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHFQ7M4L6 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 RN7SKP191-201ENST00000364713 306 ntBASIC5.69□□□□□ -1.5
SHFQ7M4L6 RNU1-59P-201ENST00000364829 162 ntBASIC5.69□□□□□ -1.5
SHFQ7M4L6 RNA5SP302-201ENST00000364896 100 ntBASIC5.69□□□□□ -1.5
SHFQ7M4L6 RN7SKP186-201ENST00000365371 303 ntBASIC5.69□□□□□ -1.5
SHFQ7M4L6 AL451061.1-201ENST00000407887 862 ntBASIC5.69□□□□□ -1.5
SHFQ7M4L6 AC002127.1-201ENST00000421305 225 ntBASIC5.69□□□□□ -1.5
SHFQ7M4L6 MTND2P9-201ENST00000422293 931 ntBASIC5.69□□□□□ -1.5
SHFQ7M4L6 MRPS21P2-201ENST00000424704 264 ntBASIC5.69□□□□□ -1.5
SHFQ7M4L6 AL138479.1-201ENST00000426913 484 ntBASIC5.69□□□□□ -1.5
SHFQ7M4L6 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 AC079922.1-201ENST00000443291 359 ntBASIC5.69□□□□□ -1.5
SHFQ7M4L6 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 AC022080.2-201ENST00000452932 533 ntBASIC5.69□□□□□ -1.5
SHFQ7M4L6 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.69□□□□□ -1.5
SHFQ7M4L6 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 AC009120.3-201ENST00000563335 499 ntBASIC5.69□□□□□ -1.5
SHFQ7M4L6 MIR3189-201ENST00000578735 73 ntBASIC5.69□□□□□ -1.5
SHFQ7M4L6 AC090616.1-201ENST00000583895 447 ntBASIC5.69□□□□□ -1.5
SHFQ7M4L6 AC090241.1-201ENST00000587732 621 ntBASIC5.69□□□□□ -1.5
SHFQ7M4L6 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 AC105148.1-201ENST00000604961 409 ntBASIC5.69□□□□□ -1.5
SHFQ7M4L6 AC019257.2-201ENST00000605539 497 ntBASIC5.69□□□□□ -1.5
SHFQ7M4L6 AL137000.1-201ENST00000610528 1244 ntBASIC5.69□□□□□ -1.5
SHFQ7M4L6 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.69□□□□□ -1.5
SHFQ7M4L6 U1.25-201ENST00000614085 162 ntBASIC5.69□□□□□ -1.5
SHFQ7M4L6 U1.34-201ENST00000618578 162 ntBASIC5.69□□□□□ -1.5
SHFQ7M4L6 U1.31-201ENST00000620022 160 ntBASIC5.69□□□□□ -1.5
SHFQ7M4L6 AL121985.3-201ENST00000620690 523 ntBASIC5.69□□□□□ -1.5
SHFQ7M4L6 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 AC006453.5-201ENST00000636451 619 ntBASIC5.69□□□□□ -1.5
SHFQ7M4L6 AL359976.1-201ENST00000418655 3528 ntBASIC5.69□□□□□ -1.5
SHFQ7M4L6 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHFQ7M4L6 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHFQ7M4L6 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHFQ7M4L6 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SHFQ7M4L6 AC068446.1-201ENST00000556425 1549 ntBASIC5.69□□□□□ -1.5
SHFQ7M4L6 AL512283.1-201ENST00000606756 1384 ntBASIC5.68□□□□□ -1.5
SHFQ7M4L6 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.68□□□□□ -1.5
SHFQ7M4L6 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHFQ7M4L6 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHFQ7M4L6 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHFQ7M4L6 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.68□□□□□ -1.5
SHFQ7M4L6 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHFQ7M4L6 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.68□□□□□ -1.5
SHFQ7M4L6 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHFQ7M4L6 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SHFQ7M4L6 PPIAP24-201ENST00000328558 471 ntBASIC5.68□□□□□ -1.5
SHFQ7M4L6 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.68□□□□□ -1.5
SHFQ7M4L6 AC019178.1-201ENST00000392337 440 ntBASIC5.68□□□□□ -1.5
SHFQ7M4L6 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHFQ7M4L6 NPM1P37-201ENST00000403105 874 ntBASIC5.68□□□□□ -1.5
SHFQ7M4L6 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.68□□□□□ -1.5
SHFQ7M4L6 AL139135.1-201ENST00000412675 209 ntBASIC5.68□□□□□ -1.5
SHFQ7M4L6 MYB-206ENST00000420123 1051 ntTSL 5 BASIC5.68□□□□□ -1.5
SHFQ7M4L6 MTND4LP7-201ENST00000431728 294 ntBASIC5.68□□□□□ -1.5
SHFQ7M4L6 AC074367.1-201ENST00000438685 1125 ntBASIC5.68□□□□□ -1.5
SHFQ7M4L6 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHFQ7M4L6 AL353718.1-201ENST00000451028 517 ntBASIC5.68□□□□□ -1.5
SHFQ7M4L6 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHFQ7M4L6 RN7SKP198-201ENST00000459286 306 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms