Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 DTNA-209ENST00000556414 1626 ntTSL 2 BASIC7.96□□□□□ -1.14
FOXR1Q6PIV2 AL353763.1-201ENST00000624467 1628 ntBASIC7.96□□□□□ -1.14
FOXR1Q6PIV2 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.96□□□□□ -1.14
FOXR1Q6PIV2 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
FOXR1Q6PIV2 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
FOXR1Q6PIV2 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 LGSN-201ENST00000370657 1949 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 ASPH-207ENST00000517847 1947 ntTSL 5 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 CTH-201ENST00000346806 1196 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 FGF7P8-201ENST00000402994 292 ntBASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 MIR1231-201ENST00000408101 92 ntBASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 MEAF6P1-201ENST00000416092 327 ntBASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 LINC00426-202ENST00000417079 1045 ntTSL 3 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 RPS21P1-201ENST00000434479 247 ntBASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 LINC01007-203ENST00000451953 579 ntTSL 4 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 PTMAP1-205ENST00000455552 325 ntBASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 AC126615.1-201ENST00000470084 630 ntBASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 AC015864.1-201ENST00000496512 544 ntBASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 CC2D2A-205ENST00000503658 605 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 AC110741.1-201ENST00000520149 582 ntTSL 3 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 AC106038.2-201ENST00000520706 568 ntBASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 MIR2052HG-204ENST00000523442 550 ntTSL 4 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 AC005000.1-201ENST00000536192 288 ntBASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 AC006065.2-201ENST00000536978 211 ntBASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 CRADD-210ENST00000552033 622 ntTSL 3 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 AC104046.1-201ENST00000559487 406 ntBASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 AC009063.1-201ENST00000563342 702 ntBASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 UBE2FP2-201ENST00000566646 462 ntBASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 FLJ21408-204ENST00000566854 601 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 MIR3714-201ENST00000579507 65 ntBASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 AP005119.2-201ENST00000579735 1105 ntBASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 STARD6-204ENST00000584040 660 ntTSL 3 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 RIT2-202ENST00000589109 1156 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 YWHAQP7-201ENST00000603536 658 ntBASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 BNIP3P9-201ENST00000603714 553 ntBASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 AC092681.3-201ENST00000609463 678 ntBASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 LINC02391-201ENST00000615716 800 ntTSL 5 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 AC073488.2-201ENST00000631903 751 ntBASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 NEK2P4-201ENST00000425793 1329 ntBASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 CDK1-203ENST00000395284 1913 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 FAM107B-201ENST00000181796 3785 ntTSL 2 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 AC007406.5-201ENST00000570140 3170 ntBASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 IL15-207ENST00000514653 1388 ntTSL 5 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 INPP5B-205ENST00000373027 3905 ntTSL 2 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC7.95□□□□□ -1.14
FOXR1Q6PIV2 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms