Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 Y_RNA.710-201ENST00000516975 110 ntBASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 OR4A6P-201ENST00000534364 970 ntBASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 AC007494.1-201ENST00000562293 760 ntBASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 BX322635.1-201ENST00000605804 496 ntBASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 AC099654.15-201ENST00000639802 509 ntBASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 LINC01613-201ENST00000561476 2780 ntBASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 PRELID1P1-201ENST00000403549 660 ntBASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 EIF3EP1-201ENST00000433978 1316 ntBASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 H3F3BP1-201ENST00000440551 403 ntBASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 HIGD1AP16-201ENST00000450986 258 ntBASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 AL513343.1-201ENST00000451818 792 ntBASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 RPL34P33-201ENST00000486062 334 ntBASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 AC024587.1-201ENST00000505925 2157 ntBASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 HMGN1P16-201ENST00000508308 283 ntBASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 RN7SKP67-201ENST00000515905 235 ntBASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 SNORA74.1-201ENST00000516320 180 ntBASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 AC036111.2-201ENST00000533247 901 ntBASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 AC005632.2-201ENST00000564271 828 ntBASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 WBP1LP12-201ENST00000604449 331 ntBASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 AC011891.2-201ENST00000604949 397 ntBASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 MIR6811-201ENST00000620409 58 ntBASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 AC010809.3-201ENST00000621310 641 ntBASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 AC023510.2-201ENST00000622162 746 ntBASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 AC090506.2-201ENST00000624521 419 ntBASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 DNM1P47-203ENST00000571780 12667 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms