Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.51□□□□□ -1.53
H3F3AP84243 RN7SKP151-201ENST00000410230 316 ntBASIC5.51□□□□□ -1.53
H3F3AP84243 RPL7AP14-201ENST00000424041 802 ntBASIC5.51□□□□□ -1.53
H3F3AP84243 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.51□□□□□ -1.53
H3F3AP84243 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.51□□□□□ -1.53
H3F3AP84243 AC079922.1-201ENST00000443291 359 ntBASIC5.51□□□□□ -1.53
H3F3AP84243 RPL5P7-201ENST00000444235 813 ntBASIC5.51□□□□□ -1.53
H3F3AP84243 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.51□□□□□ -1.53
H3F3AP84243 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.51□□□□□ -1.53
H3F3AP84243 RPL23AP60-201ENST00000450011 454 ntBASIC5.51□□□□□ -1.53
H3F3AP84243 HMGB1P7-201ENST00000450921 612 ntBASIC5.51□□□□□ -1.53
H3F3AP84243 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.51□□□□□ -1.53
H3F3AP84243 RN7SL254P-201ENST00000460609 284 ntBASIC5.51□□□□□ -1.53
H3F3AP84243 AC073594.1-201ENST00000462065 364 ntBASIC5.51□□□□□ -1.53
H3F3AP84243 CYP4F27P-201ENST00000514557 494 ntBASIC5.51□□□□□ -1.53
H3F3AP84243 IGKV2-19-201ENST00000518132 283 ntBASIC5.51□□□□□ -1.53
H3F3AP84243 AC023310.2-201ENST00000553844 547 ntBASIC5.51□□□□□ -1.53
H3F3AP84243 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.51□□□□□ -1.53
H3F3AP84243 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.51□□□□□ -1.53
H3F3AP84243 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.51□□□□□ -1.53
H3F3AP84243 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
H3F3AP84243 AC141002.1-201ENST00000607025 279 ntBASIC5.51□□□□□ -1.53
H3F3AP84243 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.51□□□□□ -1.53
H3F3AP84243 AC022106.1-201ENST00000612834 766 ntBASIC5.51□□□□□ -1.53
H3F3AP84243 AL591926.1-201ENST00000620542 217 ntBASIC5.51□□□□□ -1.53
H3F3AP84243 AC073488.6-201ENST00000632293 754 ntBASIC5.51□□□□□ -1.53
H3F3AP84243 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
H3F3AP84243 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
H3F3AP84243 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.51□□□□□ -1.53
H3F3AP84243 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.51□□□□□ -1.53
H3F3AP84243 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.51□□□□□ -1.53
H3F3AP84243 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
H3F3AP84243 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.51□□□□□ -1.53
H3F3AP84243 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
H3F3AP84243 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
H3F3AP84243 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.51□□□□□ -1.53
H3F3AP84243 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
H3F3AP84243 EIF3EP1-201ENST00000433978 1316 ntBASIC5.5□□□□□ -1.53
H3F3AP84243 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
H3F3AP84243 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.5□□□□□ -1.53
H3F3AP84243 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
H3F3AP84243 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
H3F3AP84243 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
H3F3AP84243 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
H3F3AP84243 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
H3F3AP84243 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
H3F3AP84243 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
H3F3AP84243 USP9YP3-201ENST00000434481 1766 ntBASIC5.5□□□□□ -1.53
H3F3AP84243 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
H3F3AP84243 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
H3F3AP84243 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
H3F3AP84243 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
H3F3AP84243 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
H3F3AP84243 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.5□□□□□ -1.53
H3F3AP84243 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
H3F3AP84243 RNA5SP279-201ENST00000365513 117 ntBASIC5.5□□□□□ -1.53
H3F3AP84243 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.5□□□□□ -1.53
H3F3AP84243 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.5□□□□□ -1.53
H3F3AP84243 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
H3F3AP84243 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.5□□□□□ -1.53
H3F3AP84243 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.5□□□□□ -1.53
H3F3AP84243 RPS17P17-201ENST00000419392 409 ntBASIC5.5□□□□□ -1.53
H3F3AP84243 NME1P1-201ENST00000420914 382 ntBASIC5.5□□□□□ -1.53
H3F3AP84243 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.5□□□□□ -1.53
H3F3AP84243 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.5□□□□□ -1.53
H3F3AP84243 AC130360.1-201ENST00000425489 1117 ntBASIC5.5□□□□□ -1.53
H3F3AP84243 AL354707.3-201ENST00000427308 331 ntBASIC5.5□□□□□ -1.53
H3F3AP84243 EEF1B2P3-201ENST00000447718 678 ntBASIC5.5□□□□□ -1.53
H3F3AP84243 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.5□□□□□ -1.53
H3F3AP84243 RPL7L1P3-201ENST00000455249 689 ntBASIC5.5□□□□□ -1.53
H3F3AP84243 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.5□□□□□ -1.53
H3F3AP84243 AP002453.1-201ENST00000492327 668 ntBASIC5.5□□□□□ -1.53
H3F3AP84243 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.5□□□□□ -1.53
H3F3AP84243 OR7E99P-201ENST00000505750 922 ntBASIC5.5□□□□□ -1.53
H3F3AP84243 HSD3BP3-201ENST00000514706 994 ntBASIC5.5□□□□□ -1.53
H3F3AP84243 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.5□□□□□ -1.53
H3F3AP84243 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.5□□□□□ -1.53
H3F3AP84243 AC130365.2-201ENST00000525882 1201 ntBASIC5.5□□□□□ -1.53
H3F3AP84243 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.5□□□□□ -1.53
H3F3AP84243 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.5□□□□□ -1.53
H3F3AP84243 AC090651.1-201ENST00000567865 634 ntBASIC5.5□□□□□ -1.53
H3F3AP84243 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.5□□□□□ -1.53
H3F3AP84243 AC124916.2-201ENST00000604416 224 ntBASIC5.5□□□□□ -1.53
H3F3AP84243 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
H3F3AP84243 AC022325.1-201ENST00000502748 2199 ntBASIC5.5□□□□□ -1.53
H3F3AP84243 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
H3F3AP84243 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
H3F3AP84243 AP000432.2-201ENST00000624164 2048 ntBASIC5.5□□□□□ -1.53
H3F3AP84243 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
H3F3AP84243 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.5□□□□□ -1.53
H3F3AP84243 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
H3F3AP84243 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
H3F3AP84243 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
H3F3AP84243 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
H3F3AP84243 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
H3F3AP84243 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.49□□□□□ -1.53
H3F3AP84243 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.49□□□□□ -1.53
H3F3AP84243 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
H3F3AP84243 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
H3F3AP84243 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms