Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.08□□□□□ -1.6
LMO4P61968 PSMA2P2-201ENST00000504319 686 ntBASIC5.08□□□□□ -1.6
LMO4P61968 SNORA48.9-201ENST00000516419 162 ntBASIC5.08□□□□□ -1.6
LMO4P61968 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.08□□□□□ -1.6
LMO4P61968 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.08□□□□□ -1.6
LMO4P61968 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.08□□□□□ -1.6
LMO4P61968 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
LMO4P61968 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.08□□□□□ -1.6
LMO4P61968 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.08□□□□□ -1.6
LMO4P61968 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.08□□□□□ -1.6
LMO4P61968 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.08□□□□□ -1.6
LMO4P61968 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.08□□□□□ -1.6
LMO4P61968 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.08□□□□□ -1.6
LMO4P61968 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.08□□□□□ -1.6
LMO4P61968 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.08□□□□□ -1.6
LMO4P61968 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.08□□□□□ -1.6
LMO4P61968 MIR3189-201ENST00000578735 73 ntBASIC5.08□□□□□ -1.6
LMO4P61968 AC005244.1-201ENST00000582566 339 ntBASIC5.08□□□□□ -1.6
LMO4P61968 NPIPB1P-202ENST00000588786 828 ntBASIC5.08□□□□□ -1.6
LMO4P61968 AC105148.1-201ENST00000604961 409 ntBASIC5.08□□□□□ -1.6
LMO4P61968 AL021368.1-201ENST00000607490 540 ntBASIC5.08□□□□□ -1.6
LMO4P61968 AC079414.3-201ENST00000612986 1090 ntBASIC5.08□□□□□ -1.6
LMO4P61968 MIR6729-201ENST00000618194 65 ntBASIC5.08□□□□□ -1.6
LMO4P61968 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
LMO4P61968 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.08□□□□□ -1.6
LMO4P61968 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.08□□□□□ -1.6
LMO4P61968 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC5.08□□□□□ -1.6
LMO4P61968 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LMO4P61968 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LMO4P61968 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LMO4P61968 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LMO4P61968 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.08□□□□□ -1.6
LMO4P61968 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC5.08□□□□□ -1.6
LMO4P61968 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LMO4P61968 AF287957.1-201ENST00000607368 1595 ntBASIC5.08□□□□□ -1.6
LMO4P61968 AC091305.2-201ENST00000624049 1576 ntBASIC5.08□□□□□ -1.6
LMO4P61968 AC092821.2-201ENST00000545710 2042 ntBASIC5.07□□□□□ -1.6
LMO4P61968 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.07□□□□□ -1.6
LMO4P61968 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LMO4P61968 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LMO4P61968 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.07□□□□□ -1.6
LMO4P61968 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LMO4P61968 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC5.07□□□□□ -1.6
LMO4P61968 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
LMO4P61968 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.07□□□□□ -1.6
LMO4P61968 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LMO4P61968 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LMO4P61968 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.07□□□□□ -1.6
LMO4P61968 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LMO4P61968 KARSP1-201ENST00000451871 1752 ntBASIC5.07□□□□□ -1.6
LMO4P61968 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LMO4P61968 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
LMO4P61968 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5.07□□□□□ -1.6
LMO4P61968 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.07□□□□□ -1.6
LMO4P61968 TMSB4XP2-201ENST00000335179 210 ntBASIC5.07□□□□□ -1.6
LMO4P61968 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LMO4P61968 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.07□□□□□ -1.6
LMO4P61968 AC008171.1-201ENST00000395058 200 ntBASIC5.07□□□□□ -1.6
LMO4P61968 AL096800.1-201ENST00000405326 893 ntBASIC5.07□□□□□ -1.6
LMO4P61968 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.07□□□□□ -1.6
LMO4P61968 CDY17P-201ENST00000414121 1282 ntBASIC5.07□□□□□ -1.6
LMO4P61968 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC5.07□□□□□ -1.6
LMO4P61968 RPL12P12-201ENST00000424633 501 ntBASIC5.07□□□□□ -1.6
LMO4P61968 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.07□□□□□ -1.6
LMO4P61968 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LMO4P61968 NDUFS5P5-201ENST00000437256 321 ntBASIC5.07□□□□□ -1.6
LMO4P61968 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.07□□□□□ -1.6
LMO4P61968 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.07□□□□□ -1.6
LMO4P61968 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.07□□□□□ -1.6
LMO4P61968 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.07□□□□□ -1.6
LMO4P61968 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.07□□□□□ -1.6
LMO4P61968 AC104109.1-201ENST00000498563 436 ntBASIC5.07□□□□□ -1.6
LMO4P61968 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.07□□□□□ -1.6
LMO4P61968 SNORD46.2-201ENST00000516021 102 ntBASIC5.07□□□□□ -1.6
LMO4P61968 SCARNA18.1-201ENST00000516330 83 ntBASIC5.07□□□□□ -1.6
LMO4P61968 RNA5SP400-201ENST00000517155 111 ntBASIC5.07□□□□□ -1.6
LMO4P61968 AC022826.1-201ENST00000519383 805 ntBASIC5.07□□□□□ -1.6
LMO4P61968 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.07□□□□□ -1.6
LMO4P61968 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LMO4P61968 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.07□□□□□ -1.6
LMO4P61968 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.07□□□□□ -1.6
LMO4P61968 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.07□□□□□ -1.6
LMO4P61968 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.07□□□□□ -1.6
LMO4P61968 AC141002.1-201ENST00000607025 279 ntBASIC5.07□□□□□ -1.6
LMO4P61968 AC144521.1-201ENST00000607148 956 ntBASIC5.07□□□□□ -1.6
LMO4P61968 MIR6793-201ENST00000612376 63 ntBASIC5.07□□□□□ -1.6
LMO4P61968 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC5.07□□□□□ -1.6
LMO4P61968 AC096861.1-201ENST00000616652 240 ntBASIC5.07□□□□□ -1.6
LMO4P61968 AL137067.2-201ENST00000621202 131 ntBASIC5.07□□□□□ -1.6
LMO4P61968 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.07□□□□□ -1.6
LMO4P61968 AL357562.1-201ENST00000624911 609 ntBASIC5.07□□□□□ -1.6
LMO4P61968 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.07□□□□□ -1.6
LMO4P61968 AC138627.1-204ENST00000641894 765 ntBASIC5.07□□□□□ -1.6
LMO4P61968 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LMO4P61968 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.07□□□□□ -1.6
LMO4P61968 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LMO4P61968 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC5.07□□□□□ -1.6
LMO4P61968 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.07□□□□□ -1.6
LMO4P61968 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LMO4P61968 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms