Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AL109741.3-201ENST00000561748 592 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC6.08□□□□□ -1.44
CLRN1P58418 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC6.08□□□□□ -1.44
CLRN1P58418 CBX3P2-202ENST00000583365 535 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 AC015818.6-201ENST00000584274 634 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.08□□□□□ -1.44
CLRN1P58418 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.08□□□□□ -1.44
CLRN1P58418 AL031429.2-201ENST00000602605 649 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 AL049844.2-201ENST00000604280 628 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.08□□□□□ -1.44
CLRN1P58418 AL592494.3-201ENST00000609485 464 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.08□□□□□ -1.44
CLRN1P58418 AC010333.3-201ENST00000615100 402 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 AL121985.3-201ENST00000620690 523 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 AC103564.3-201ENST00000621194 220 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 AC025287.2-201ENST00000621911 668 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 AC078883.4-201ENST00000623218 367 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 AC120057.5-201ENST00000623840 154 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 AC093909.6-201ENST00000624757 775 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.08□□□□□ -1.44
CLRN1P58418 AC068620.4-201ENST00000636730 1182 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 AL354702.2-202ENST00000641481 890 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 AC110597.1-201ENST00000562669 3176 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLRN1P58418 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CLRN1P58418 CLCA3P-203ENST00000490028 2781 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CLRN1P58418 MTND5P11-201ENST00000511037 1812 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLRN1P58418 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLRN1P58418 AC092646.2-201ENST00000431242 2095 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLRN1P58418 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CLRN1P58418 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CLRN1P58418 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLRN1P58418 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLRN1P58418 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.08□□□□□ -1.44
CLRN1P58418 CDY11P-201ENST00000447168 1651 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 AC093278.2-201ENST00000564956 2485 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CLRN1P58418 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CLRN1P58418 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.07□□□□□ -1.44
CLRN1P58418 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.07□□□□□ -1.44
CLRN1P58418 MROH3P-201ENST00000435735 2676 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.07□□□□□ -1.44
CLRN1P58418 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLRN1P58418 AL512329.1-201ENST00000404600 1592 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLRN1P58418 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.07□□□□□ -1.44
CLRN1P58418 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CLRN1P58418 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLRN1P58418 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLRN1P58418 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLRN1P58418 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CLRN1P58418 SNORD65-201ENST00000391079 73 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 RNU1-56P-201ENST00000391303 164 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC6.07□□□□□ -1.44
CLRN1P58418 CASP3-203ENST00000393588 677 ntTSL 4 BASIC6.07□□□□□ -1.44
CLRN1P58418 AL603865.2-201ENST00000401679 213 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CLRN1P58418 SOD1P1-201ENST00000407803 440 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 ZNF885P-201ENST00000420174 1098 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.07□□□□□ -1.44
CLRN1P58418 GAPDHP57-201ENST00000424400 585 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 CHCHD4P5-201ENST00000436684 427 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.07□□□□□ -1.44
CLRN1P58418 AC027124.1-201ENST00000440852 466 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC6.07□□□□□ -1.44
CLRN1P58418 OR7E7P-201ENST00000455678 1012 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 AC079193.1-201ENST00000460497 588 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.07□□□□□ -1.44
CLRN1P58418 RPS16P9-201ENST00000477220 427 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 PPP1R2P6-201ENST00000478565 588 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 RN7SL849P-201ENST00000485236 295 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLRN1P58418 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.07□□□□□ -1.44
CLRN1P58418 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC6.07□□□□□ -1.44
CLRN1P58418 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLRN1P58418 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC6.07□□□□□ -1.44
CLRN1P58418 RNU6-1334P-201ENST00000516032 105 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 RNA5SP278-201ENST00000517055 102 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CLRN1P58418 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.07□□□□□ -1.44
CLRN1P58418 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC6.07□□□□□ -1.44
CLRN1P58418 OR7E128P-201ENST00000532736 1024 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.07□□□□□ -1.44
CLRN1P58418 AC124891.1-201ENST00000536322 519 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC6.07□□□□□ -1.44
CLRN1P58418 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
CLRN1P58418 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLRN1P58418 AC126323.4-201ENST00000566935 234 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 AC106734.1-201ENST00000568646 663 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 AC021171.1-201ENST00000603137 706 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC6.07□□□□□ -1.44
CLRN1P58418 AC069304.3-201ENST00000603938 1084 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.07□□□□□ -1.44
CLRN1P58418 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6.07□□□□□ -1.44
CLRN1P58418 PART1_2.1-201ENST00000612397 250 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms