Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC245028.1-201ENST00000423259 256 ntBASIC6.32□□□□□ -1.4
BRCA2P51587 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.32□□□□□ -1.4
BRCA2P51587 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.32□□□□□ -1.4
BRCA2P51587 EIF3FP1-201ENST00000613970 806 ntBASIC6.32□□□□□ -1.4
BRCA2P51587 AL139099.4-201ENST00000614802 114 ntBASIC6.32□□□□□ -1.4
BRCA2P51587 AC109583.2-201ENST00000617367 129 ntBASIC6.32□□□□□ -1.4
BRCA2P51587 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.32□□□□□ -1.4
BRCA2P51587 AC022726.2-201ENST00000634673 547 ntBASIC6.32□□□□□ -1.4
BRCA2P51587 OPA3-201ENST00000263275 7828 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
BRCA2P51587 ARID1B-210ENST00000635849 5830 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
BRCA2P51587 EPHA5-201ENST00000273854 8266 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
BRCA2P51587 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
BRCA2P51587 SLC25A16-207ENST00000609923 6529 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
BRCA2P51587 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.32□□□□□ -1.4
BRCA2P51587 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC6.32□□□□□ -1.4
BRCA2P51587 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.32□□□□□ -1.4
BRCA2P51587 AC015983.1-201ENST00000441577 373 ntBASIC6.32□□□□□ -1.4
BRCA2P51587 AL161747.1-201ENST00000480068 358 ntBASIC6.32□□□□□ -1.4
BRCA2P51587 RNA5SP400-201ENST00000517155 111 ntBASIC6.32□□□□□ -1.4
BRCA2P51587 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.32□□□□□ -1.4
BRCA2P51587 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
BRCA2P51587 AP000919.1-201ENST00000582850 985 ntBASIC6.32□□□□□ -1.4
BRCA2P51587 AC093799.2-201ENST00000610062 578 ntBASIC6.32□□□□□ -1.4
BRCA2P51587 AC010435.1-201ENST00000623353 1177 ntBASIC6.32□□□□□ -1.4
BRCA2P51587 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
BRCA2P51587 TNC-201ENST00000341037 6786 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
BRCA2P51587 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
BRCA2P51587 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
BRCA2P51587 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.32□□□□□ -1.4
BRCA2P51587 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
BRCA2P51587 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
BRCA2P51587 RNU6-941P-201ENST00000516346 108 ntBASIC6.32□□□□□ -1.4
BRCA2P51587 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.32□□□□□ -1.4
BRCA2P51587 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.32□□□□□ -1.4
BRCA2P51587 HSPA8P14-201ENST00000552265 1805 ntBASIC6.32□□□□□ -1.4
BRCA2P51587 AC005618.1-201ENST00000606901 3148 ntBASIC6.32□□□□□ -1.4
BRCA2P51587 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC6.32□□□□□ -1.4
BRCA2P51587 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.32□□□□□ -1.4
BRCA2P51587 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
BRCA2P51587 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
BRCA2P51587 PANDAR-201ENST00000629595 1506 ntBASIC6.31□□□□□ -1.4
BRCA2P51587 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
BRCA2P51587 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.31□□□□□ -1.4
BRCA2P51587 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
BRCA2P51587 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
BRCA2P51587 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
BRCA2P51587 AL590392.1-201ENST00000604960 446 ntBASIC6.31□□□□□ -1.4
BRCA2P51587 MFSD8-239ENST00000641590 2479 ntBASIC6.31□□□□□ -1.4
BRCA2P51587 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.31□□□□□ -1.4
BRCA2P51587 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
BRCA2P51587 PTGS1-205ENST00000540753 5375 ntTSL 2 BASIC6.31□□□□□ -1.4
BRCA2P51587 ICA1L-222ENST00000617388 8151 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
BRCA2P51587 MTHFR-203ENST00000376585 8094 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
BRCA2P51587 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
BRCA2P51587 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
BRCA2P51587 APC2-203ENST00000535453 11656 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
BRCA2P51587 AL353625.1-202ENST00000366273 571 ntBASIC6.31□□□□□ -1.4
BRCA2P51587 DSTNP5-201ENST00000427921 523 ntBASIC6.31□□□□□ -1.4
BRCA2P51587 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.31□□□□□ -1.4
BRCA2P51587 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
BRCA2P51587 AC134349.2-201ENST00000535136 910 ntBASIC6.31□□□□□ -1.4
BRCA2P51587 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
BRCA2P51587 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.31□□□□□ -1.4
BRCA2P51587 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.31□□□□□ -1.4
BRCA2P51587 WBP1LP8-201ENST00000617401 327 ntBASIC6.31□□□□□ -1.4
BRCA2P51587 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
BRCA2P51587 MAPK10-261ENST00000641050 3109 ntBASIC6.31□□□□□ -1.4
BRCA2P51587 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
BRCA2P51587 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
BRCA2P51587 CALCOCO1-201ENST00000262059 5866 ntAPPRIS ALT1 TSL 2 BASIC6.31□□□□□ -1.4
BRCA2P51587 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
BRCA2P51587 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
BRCA2P51587 AC114947.2-201ENST00000565748 2125 ntBASIC6.31□□□□□ -1.4
BRCA2P51587 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
BRCA2P51587 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.31□□□□□ -1.4
BRCA2P51587 MIGA1-201ENST00000370791 5288 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
BRCA2P51587 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.31□□□□□ -1.4
BRCA2P51587 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.31□□□□□ -1.4
BRCA2P51587 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
BRCA2P51587 AC011453.2-201ENST00000603737 729 ntBASIC6.31□□□□□ -1.4
BRCA2P51587 AC087283.1-201ENST00000604029 1074 ntBASIC6.31□□□□□ -1.4
BRCA2P51587 uc_338.26-201ENST00000612659 160 ntBASIC6.31□□□□□ -1.4
BRCA2P51587 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
BRCA2P51587 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BRCA2P51587 AC008555.2-202ENST00000601776 5302 ntTSL 2 BASIC6.3□□□□□ -1.4
BRCA2P51587 SV2C-202ENST00000502798 11035 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BRCA2P51587 ZNF609-201ENST00000326648 8746 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
BRCA2P51587 AC083902.2-201ENST00000511828 10086 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BRCA2P51587 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
BRCA2P51587 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
BRCA2P51587 DDX3X-217ENST00000629496 5023 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
BRCA2P51587 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
BRCA2P51587 PIEZO2-202ENST00000383408 9718 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
BRCA2P51587 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BRCA2P51587 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.3□□□□□ -1.4
BRCA2P51587 RNU1-43P-201ENST00000365052 165 ntBASIC6.3□□□□□ -1.4
BRCA2P51587 AC073264.2-201ENST00000448886 166 ntBASIC6.3□□□□□ -1.4
BRCA2P51587 AC234781.3-201ENST00000452540 973 ntBASIC6.3□□□□□ -1.4
BRCA2P51587 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BRCA2P51587 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms